RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TAGLN2P37802 199 aaKnown RBP14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 C9orf47Q6ZRZ4 202 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 GOLT1AQ6ZVE7 132 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 ODF3Q96PU9 254 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 SPATA25Q9BR10 227 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 TXNDC17Q9BRA2 123 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 ATG101Q9BSB4 218 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 EPDR1Q9UM22 224 aa14.82□□□□□ -0.04
RHBDD3-201ENST00000216085 TCRAP04437 139 aa14.81□□□□□ -0.04
RHBDD3-201ENST00000216085 NHLRC4P0CG21 123 aaPredicted RBP14.81□□□□□ -0.04
RHBDD3-201ENST00000216085 CYB561D1Q8N8Q1 229 aa14.81□□□□□ -0.04
RHBDD3-201ENST00000216085 HIST1H2BAQ96A08 127 aa14.81□□□□□ -0.04
RHBDD3-201ENST00000216085 LEPP41159 167 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 GNG5P63218 68 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 PMS2P11Q13670 270 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 SLC35B3Q9H1N7 401 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 FBLL1A6NHQ2 334 aaKnown RBP14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 C11orf94C9JXX5 98 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 NMBP08949 121 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 AMTNQ6UX39 209 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 RCHY1Q96PM5 261 aa14.8□□□□□ -0.04
RHBDD3-201ENST00000216085 CDKN1BP46527 198 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 ZNF138P52744 262 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 CCL20P78556 96 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 ERCC8Q13216 396 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 DEFB135Q30KP9 77 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 AGPAT4-IT1Q9H0P7 198 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 TP53TG1Q9Y2A0 90 aa14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 PRKDCP78527 4128 aaKnown RBP14.79□□□□□ -0.04
RHBDD3-201ENST00000216085 PEX7O00628 323 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 FXYD7P58549 80 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 SPINK13Q1W4C9 94 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 VGLL1Q99990 258 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 TM2D3Q9BRN9 247 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 XCL2Q9UBD3 114 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 INSP01308 110 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 CT45A10P0DMU9 189 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 BCL2P10415 239 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 ATP5G3P48201 142 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 LYPD6BQ8NI32 183 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 PCNPQ8WW12 178 aaKnown RBP14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 NDFIP1Q9BT67 221 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 MED9Q9NWA0 146 aa14.78□□□□□ -0.04
RHBDD3-201ENST00000216085 TRBV7-9A0A0J9YWB2 115 aa14.77□□□□□ -0.05
RHBDD3-201ENST00000216085 M0R2Z0 102 aa14.77□□□□□ -0.05
RHBDD3-201ENST00000216085 CCDC28AQ8IWP9 274 aa14.77□□□□□ -0.05
RHBDD3-201ENST00000216085 TMEM75Q8N9X5 138 aa14.77□□□□□ -0.05
RHBDD3-201ENST00000216085 ZNF492Q9P255 531 aa14.77□□□□□ -0.05
RHBDD3-201ENST00000216085 LENEPQ9Y5L5 61 aa14.77□□□□□ -0.05
RHBDD3-201ENST00000216085 SPRY2O43597 315 aa14.76□□□□□ -0.05
RHBDD3-201ENST00000216085 MEF2BQ02080 365 aaPredicted RBP14.76□□□□□ -0.05
RHBDD3-201ENST00000216085 IGF2BP2-AS1Q96M15 143 aa14.76□□□□□ -0.05
RHBDD3-201ENST00000216085 VAX2Q9UIW0 290 aa14.76□□□□□ -0.05
RHBDD3-201ENST00000216085 GOLT1BQ9Y3E0 138 aa14.76□□□□□ -0.05
RHBDD3-201ENST00000216085 UBE2G1P62253 170 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 RNF183Q96D59 192 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 PDE6DO43924 150 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 GIG44P09565 113 aaPredicted RBP14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 AKR1C3P42330 323 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 COMMD7Q86VX2 200 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 Q8TAT8 98 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 TMEM208Q9BTX3 173 aa14.75□□□□□ -0.05
RHBDD3-201ENST00000216085 NBEAL2Q6ZNJ1 2754 aa14.74□□□□□ -0.05
RHBDD3-201ENST00000216085 FLI1Q01543 452 aaPredicted RBP14.74□□□□□ -0.05
RHBDD3-201ENST00000216085 TRAV8-1A0A0A6YYK1 113 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 GPX1P07203 203 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 CRISP2P16562 243 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 FMC1Q96HJ9 113 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 C20orf144Q9BQM9 153 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 TRAV12-2A0A075B6T6 113 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 S100A9P06702 114 aaKnown RBP14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 FAM19A4Q96LR4 140 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 PSG8Q9UQ74 426 aa14.73□□□□□ -0.05
RHBDD3-201ENST00000216085 LOC102723971A0A1B0GUV8 181 aa14.72□□□□□ -0.05
RHBDD3-201ENST00000216085 RBFOX3A6NFN3 312 aa14.72□□□□□ -0.05
RHBDD3-201ENST00000216085 J3KRW8 73 aa14.72□□□□□ -0.05
RHBDD3-201ENST00000216085 SAPCD1Q5SSQ6 148 aa14.72□□□□□ -0.05
RHBDD3-201ENST00000216085 TMEM256Q8N2U0 113 aa14.72□□□□□ -0.05
RHBDD3-201ENST00000216085 CSNK1G2-AS1Q8NCQ2 148 aa14.72□□□□□ -0.05
RHBDD3-201ENST00000216085 SCO2A0A1W2PP80 73 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 PRNTQ86SH4 94 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 SGK494Q96LW2 274 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 RARRES2Q99969 163 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 OVOL2Q9BRP0 275 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 NIPSNAP3BQ9BS92 247 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 EIF5A2Q9GZV4 153 aaKnown RBP14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 RETNQ9HD89 108 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 TREM1Q9NP99 234 aa14.71□□□□□ -0.05
RHBDD3-201ENST00000216085 KLLNB2CW77 178 aa14.7□□□□□ -0.06
RHBDD3-201ENST00000216085 CRXO43186 299 aaPredicted RBP14.7□□□□□ -0.06
RHBDD3-201ENST00000216085 GFI1BQ5VTD9 330 aa14.7□□□□□ -0.06
RHBDD3-201ENST00000216085 OR11H2Q8NH07 326 aa14.7□□□□□ -0.06
RHBDD3-201ENST00000216085 IGHV3OR16-12A0A075B7B8 117 aa14.7□□□□□ -0.06
RHBDD3-201ENST00000216085 C7orf71A4D174 169 aa14.7□□□□□ -0.06
RHBDD3-201ENST00000216085 TRAV34A0A0B4J273 112 aa14.69□□□□□ -0.06
RHBDD3-201ENST00000216085 RNASE4P34096 147 aaKnown RBP14.69□□□□□ -0.06
RHBDD3-201ENST00000216085 TMEM183BQ1AE95 376 aa14.69□□□□□ -0.06
RHBDD3-201ENST00000216085 TOR2AQ5JU69 321 aa14.69□□□□□ -0.06
RHBDD3-201ENST00000216085 Q86TA4 180 aa14.69□□□□□ -0.06
RHBDD3-201ENST00000216085 ZFAND2AQ8N6M9 145 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms