RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 M0R3E3 92 aa10.98□□□□□ -0.65
ERCC1-201ENST00000013807 BAXQ07812 192 aa10.98□□□□□ -0.65
ERCC1-201ENST00000013807 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
ERCC1-201ENST00000013807 C9orf47Q6ZRZ4 202 aa10.98□□□□□ -0.65
ERCC1-201ENST00000013807 KRTAP4-5Q9BYR2 181 aa10.98□□□□□ -0.65
ERCC1-201ENST00000013807 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
ERCC1-201ENST00000013807 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
ERCC1-201ENST00000013807 UBE2L5PA0A1B0GUS4 154 aa10.97□□□□□ -0.65
ERCC1-201ENST00000013807 C7orf71A4D174 169 aa10.97□□□□□ -0.65
ERCC1-201ENST00000013807 C16orf90A8MZG2 172 aa10.97□□□□□ -0.65
ERCC1-201ENST00000013807 Q6ZTI0 123 aa10.97□□□□□ -0.65
ERCC1-201ENST00000013807 NPCDR1Q9BY65 106 aa10.97□□□□□ -0.65
ERCC1-201ENST00000013807 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
ERCC1-201ENST00000013807 A0A0J9YY99 117 aa10.96□□□□□ -0.65
ERCC1-201ENST00000013807 FGF7P21781 194 aa10.96□□□□□ -0.65
ERCC1-201ENST00000013807 IBA57Q5T440 356 aaKnown RBP10.96□□□□□ -0.65
ERCC1-201ENST00000013807 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
ERCC1-201ENST00000013807 VSIG2Q96IQ7 327 aa10.96□□□□□ -0.65
ERCC1-201ENST00000013807 FAM167A-AS1Q96KT0 104 aa10.96□□□□□ -0.65
ERCC1-201ENST00000013807 TMPRSS5Q9H3S3 457 aa10.96□□□□□ -0.65
ERCC1-201ENST00000013807 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 FAM240BA0A1B0GVZ2 78 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 J3KRW8 73 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 SPINK4O60575 86 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 PYYP10082 97 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 S100A10P60903 97 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 CD300CQ08708 224 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 ERCC8Q13216 396 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 ZFAND2AQ8N6M9 145 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 SLC25A2Q9BXI2 301 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 GSN-AS1Q9NRJ2 163 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 TIMM9Q9Y5J7 89 aa10.95□□□□□ -0.66
ERCC1-201ENST00000013807 ABCA13Q86UQ4 5058 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 A0A096LPF7 62 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 TCL1AP56279 114 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 NHLH2Q02577 135 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 ASAH1Q13510 395 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
ERCC1-201ENST00000013807 GPN1Q9HCN4 374 aaPredicted RBP10.94□□□□□ -0.66
ERCC1-201ENST00000013807 NBEAP1P0C6P0 100 aa10.93□□□□□ -0.66
ERCC1-201ENST00000013807 BTN1A1Q13410 526 aa10.93□□□□□ -0.66
ERCC1-201ENST00000013807 GCSAMLQ5JQS6 135 aa10.93□□□□□ -0.66
ERCC1-201ENST00000013807 MZT2BQ6NZ67 158 aa10.93□□□□□ -0.66
ERCC1-201ENST00000013807 NMES1Q9C002 83 aa10.93□□□□□ -0.66
ERCC1-201ENST00000013807 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
ERCC1-201ENST00000013807 TRGV2A0A075B6R0 118 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 E5RGE8 158 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 GPX1P07203 203 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 ICAM4Q14773 271 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 MRPL32Q9BYC8 188 aaKnown RBP10.92□□□□□ -0.66
ERCC1-201ENST00000013807 SLC25A31Q9H0C2 315 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 FUT9Q9Y231 359 aa10.92□□□□□ -0.66
ERCC1-201ENST00000013807 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
ERCC1-201ENST00000013807 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 BLNKQ8WV28 456 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 FXYD5Q96DB9 178 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 ST6GAL2Q96JF0 529 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 VGLL1Q99990 258 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 OR51M1Q9H341 326 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 KLF12Q9Y4X4 402 aa10.91□□□□□ -0.66
ERCC1-201ENST00000013807 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 CYCSP99999 105 aaKnown RBP10.9□□□□□ -0.66
ERCC1-201ENST00000013807 SLAQ13239 276 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 PRR9Q5T870 116 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 MIR17HGQ75NE6 70 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 SPATA12Q7Z6I5 190 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 S100ZQ8WXG8 99 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 WDR61Q9GZS3 305 aaKnown RBP10.9□□□□□ -0.66
ERCC1-201ENST00000013807 KCNIP2Q9NS61 270 aa10.9□□□□□ -0.66
ERCC1-201ENST00000013807 IGHV1OR15-1A0A075B7D0 117 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
ERCC1-201ENST00000013807 H0YIZ8 118 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
ERCC1-201ENST00000013807 ZNF138P52744 262 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 Q6ZRN7 208 aaPredicted RBP10.89□□□□□ -0.67
ERCC1-201ENST00000013807 THAP6Q8TBB0 222 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 PAXXQ9BUH6 204 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 OR5AC2Q9NZP5 309 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 TP53TG3Q9ULZ0 132 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 LENEPQ9Y5L5 61 aa10.89□□□□□ -0.67
ERCC1-201ENST00000013807 RGS13O14921 159 aa10.88□□□□□ -0.67
ERCC1-201ENST00000013807 SIVA1O15304 175 aa10.88□□□□□ -0.67
ERCC1-201ENST00000013807 IQCF2Q8IXL9 164 aa10.88□□□□□ -0.67
ERCC1-201ENST00000013807 Q8N1X5 172 aa10.88□□□□□ -0.67
ERCC1-201ENST00000013807 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
ERCC1-201ENST00000013807 PAX4O43316 350 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 PRAF2O60831 178 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 SIX6O95475 246 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 CRYBA4P53673 196 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 KRTAP10-2P60368 255 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 ZNF266Q14584 549 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 Q6ZQT7 251 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
ERCC1-201ENST00000013807 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms