RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 LOC102723971A0A1B0GUV8 181 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 PYYP10082 97 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 TCTAP57738 103 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 ZNF767PQ75MW2 155 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 SLC25A2Q9BXI2 301 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 SMIM3Q9BZL3 60 aa10.77□□□□□ -0.69
PHGDH-231ENST00000641939 TEX48A0A1B0GUV7 120 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 IGLL5B9A064 214 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 IFNA5P01569 189 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 PDE6HQ13956 83 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 FCN2Q15485 313 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 MIR17HGQ75NE6 70 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 SCGB1C1Q8TD33 95 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 FAM167A-AS1Q96KT0 104 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 MRPL32Q9BYC8 188 aaKnown RBP10.76□□□□□ -0.69
PHGDH-231ENST00000641939 DKK2Q9UBU2 259 aa10.76□□□□□ -0.69
PHGDH-231ENST00000641939 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 NDUFB4O95168 129 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 CDKN1BP46527 198 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 FAM222AQ5U5X8 452 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 LGALS9CQ6DKI2 356 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 RPP25LQ8N5L8 163 aaKnown RBP10.75□□□□□ -0.69
PHGDH-231ENST00000641939 BLNKQ8WV28 456 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
PHGDH-231ENST00000641939 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-231ENST00000641939 FUT9Q9Y231 359 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
PHGDH-231ENST00000641939 ZNF705GA8MUZ8 300 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-231ENST00000641939 FFAR4Q5NUL3 377 aa10.74□□□□□ -0.69
PHGDH-231ENST00000641939 TMEM256Q8N2U0 113 aa10.74□□□□□ -0.69
PHGDH-231ENST00000641939 OR51M1Q9H341 326 aa10.74□□□□□ -0.69
PHGDH-231ENST00000641939 WFDC1Q9HC57 220 aa10.74□□□□□ -0.69
PHGDH-231ENST00000641939 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
PHGDH-231ENST00000641939 PRELID1Q9Y255 219 aa10.74□□□□□ -0.69
PHGDH-231ENST00000641939 YTHDF2Q9Y5A9 579 aaKnown RBP10.74□□□□□ -0.69
PHGDH-231ENST00000641939 IGHV4-4A0A075B6R2 117 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 M0R3E3 92 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 PRM2P04554 102 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 TSPOP30536 169 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 RGS21Q2M5E4 152 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 LINC01587Q99440 93 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 NIPSNAP3BQ9BS92 247 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 VPS13DQ5THJ4 4388 aa10.73□□□□□ -0.69
PHGDH-231ENST00000641939 NPIPB6E9PJ23 425 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 NBEAP1P0C6P0 100 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 TAS2R60P59551 318 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 EXOC3-AS1Q8N2X6 119 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 ASB13Q8WXK3 278 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 ODF3Q96PU9 254 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
PHGDH-231ENST00000641939 OR7C2O60412 319 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 GIPP09681 153 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-231ENST00000641939 OR10J4P0C629 311 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 CT45A10P0DMU9 189 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 LEPP41159 167 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 ICAM4Q14773 271 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 OXA1LQ15070 435 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 RNF141Q8WVD5 230 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 AQP10Q96PS8 301 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.69
PHGDH-231ENST00000641939 DNAH6Q9C0G6 4158 aa10.71□□□□□ -0.7
PHGDH-231ENST00000641939 H7BYZ3 331 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 HTN1P15515 57 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 AZU1P20160 251 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 TAS2R45P59539 299 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 DAD1P61803 113 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 KIR3DS1Q14943 382 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
PHGDH-231ENST00000641939 LYRM9A8MSI8 78 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 ERCC8Q13216 396 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 ZNF266Q14584 549 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 ACOT6Q3I5F7 207 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-231ENST00000641939 KHDC3LQ587J8 217 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 FAM122CQ6P4D5 195 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 C16orf74Q96GX8 76 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 LINC00477Q96M19 166 aa10.69□□□□□ -0.7
PHGDH-231ENST00000641939 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 J3KRW8 73 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 M6PRP20645 277 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 UBE2L3P68036 154 aaKnown RBP10.68□□□□□ -0.7
PHGDH-231ENST00000641939 Q5BKY6 102 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 ZNF493Q6ZR52 646 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 PHYHIPLQ96FC7 376 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 NDUFAF3Q9BU61 184 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
PHGDH-231ENST00000641939 IGKV2-40A0A087WW87 121 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-231ENST00000641939 IGKV2D-40P01614 121 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-231ENST00000641939 HTN3P15516 51 aa10.67□□□□□ -0.7
PHGDH-231ENST00000641939 LYPD1Q8N2G4 141 aa10.67□□□□□ -0.7
PHGDH-231ENST00000641939 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-231ENST00000641939 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
PHGDH-231ENST00000641939 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
PHGDH-231ENST00000641939 FAM210BQ96KR6 192 aa10.67□□□□□ -0.7
PHGDH-231ENST00000641939 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms