RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 OR10J4P0C629 311 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 EMP1P54849 157 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 EXOC3-AS1Q8N2X6 119 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 OR2T35Q8NGX2 323 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 ASB13Q8WXK3 278 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
PHGDH-227ENST00000641811 INSP01308 110 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 ZNF767PQ75MW2 155 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 OR10J6PQ8NGY7 276 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 FXYD5Q96DB9 178 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 ZNF503Q96F45 646 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 TMEM208Q9BTX3 173 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 PAXXQ9BUH6 204 aa12.44□□□□□ -0.42
PHGDH-227ENST00000641811 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 G3V3Q6 166 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 OR7C2O60412 319 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 PDE6HQ13956 83 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 KIR3DS1Q14943 382 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
PHGDH-227ENST00000641811 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-227ENST00000641811 HBE1P02100 147 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 RAB2AP61019 212 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 ICAM4Q14773 271 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 Q6ZTC4 211 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 RPP25LQ8N5L8 163 aaKnown RBP12.42□□□□□ -0.42
PHGDH-227ENST00000641811 INO80EQ8NBZ0 244 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-227ENST00000641811 PHYHIPLQ96FC7 376 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 LYSTQ99698 3801 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
PHGDH-227ENST00000641811 KLK5Q9Y337 293 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-227ENST00000641811 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 NPIPB6E9PJ23 425 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 SMLR1H3BR10 107 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 CT45A10P0DMU9 189 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 ERCC8Q13216 396 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 ZNF266Q14584 549 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 C12orf74Q32Q52 190 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 ACOT6Q3I5F7 207 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-227ENST00000641811 FAM122CQ6P4D5 195 aa12.41□□□□□ -0.42
PHGDH-227ENST00000641811 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
PHGDH-227ENST00000641811 JTBO76095 146 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 M6PRP20645 277 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 ATP6V0CP27449 155 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 CDKN1BP46527 198 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
PHGDH-227ENST00000641811 AAMDCQ9H7C9 122 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 PRELID1Q9Y255 219 aa12.4□□□□□ -0.42
PHGDH-227ENST00000641811 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 J3KRW8 73 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 HMGB3O15347 200 aaKnown RBP12.39□□□□□ -0.43
PHGDH-227ENST00000641811 AZU1P20160 251 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 KHDC3LQ587J8 217 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 RPL7L1Q6DKI1 246 aaKnown RBP12.39□□□□□ -0.43
PHGDH-227ENST00000641811 OR10G4Q8NGN3 311 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 OR10G9Q8NGN4 311 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 OR10G7Q8NGN6 311 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 LINC01587Q99440 93 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
PHGDH-227ENST00000641811 RYR2Q92736 4967 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 IGKV2-40A0A087WW87 121 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-227ENST00000641811 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 IGKV2D-40P01614 121 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-227ENST00000641811 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 TAS2R45P59539 299 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 RANP62826 216 aaKnown RBP12.38□□□□□ -0.43
PHGDH-227ENST00000641811 FAM222AQ5U5X8 452 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 AGPAT4-IT1Q9H0P7 198 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
PHGDH-227ENST00000641811 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
PHGDH-227ENST00000641811 PLECQ15149 4684 aaKnown RBP12.38□□□□□ -0.43
PHGDH-227ENST00000641811 HTN1P15515 57 aa12.37□□□□□ -0.43
PHGDH-227ENST00000641811 TSPOP30536 169 aa12.37□□□□□ -0.43
PHGDH-227ENST00000641811 OR2G3Q8NGZ4 309 aa12.37□□□□□ -0.43
PHGDH-227ENST00000641811 C2CD4CQ8TF44 421 aa12.37□□□□□ -0.43
PHGDH-227ENST00000641811 VGLL1Q99990 258 aa12.37□□□□□ -0.43
PHGDH-227ENST00000641811 PSMG3Q9BT73 122 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-227ENST00000641811 SACSQ9NZJ4 4579 aa12.37□□□□□ -0.43
PHGDH-227ENST00000641811 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 IGLL5B9A064 214 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 C11orf94C9JXX5 98 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 ARPC5O15511 151 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 LEPP41159 167 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 TMEM256Q8N2U0 113 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 Q9H3A6 140 aa12.36□□□□□ -0.43
PHGDH-227ENST00000641811 BORCS7-ASMTA0A0B4J1R7 106 aa12.35□□□□□ -0.43
PHGDH-227ENST00000641811 LINC00476Q8WZB0 136 aa12.35□□□□□ -0.43
PHGDH-227ENST00000641811 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
PHGDH-227ENST00000641811 ODF3Q96PU9 254 aa12.35□□□□□ -0.43
PHGDH-227ENST00000641811 DEFB131BA0A096LNP1 70 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 LY6G6CO95867 125 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-227ENST00000641811 TAS2R60P59551 318 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms