RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 EXOC3-AS1Q8N2X6 119 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 BLNKQ8WV28 456 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 C16orf92Q96LL3 132 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 TXNDC17Q9BRA2 123 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 TCEAL7Q9BRU2 100 aa6.76□□□□□ -1.33
SCARB2-225ENST00000640900 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
SCARB2-225ENST00000640900 LOC102723971A0A1B0GUV8 181 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 PGPA6NDG6 321 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 A8MZ25 164 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 M0R3E3 92 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 PAGE4O60829 102 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 CD7P09564 240 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 ZNF688P0C7X2 276 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 BCL2P10415 239 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 CD81P60033 236 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
SCARB2-225ENST00000640900 ICAM4Q14773 271 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 GUCA2BQ16661 112 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 ZNF506Q5JVG8 444 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 C5orf17Q8NAS9 161 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 PCNPQ8WW12 178 aaKnown RBP6.75□□□□□ -1.33
SCARB2-225ENST00000640900 C11orf52Q96A22 123 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 FAM210AQ96ND0 272 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 CITED4Q96RK1 184 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 PPP1R14DQ9NXH3 145 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 KLF12Q9Y4X4 402 aa6.75□□□□□ -1.33
SCARB2-225ENST00000640900 A0A0J9YX75 114 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 LINC00862A6NCI5 91 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 ZNF705FA8MVS1 300 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-225ENST00000640900 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 PRAC2D3DTV9 90 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 SLC25A5P05141 298 aaKnown RBP6.74□□□□□ -1.33
SCARB2-225ENST00000640900 TFPI2P48307 235 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 DEFB131AP59861 70 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 SUMO1P63165 101 aaKnown RBP6.74□□□□□ -1.33
SCARB2-225ENST00000640900 LINC00322Q6ZN03 302 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-225ENST00000640900 FOXI2Q6ZQN5 318 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 RXFP4Q8TDU9 374 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 SAV1Q9H4B6 383 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-225ENST00000640900 AAMDCQ9H7C9 122 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 GNG13Q9P2W3 67 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 VAX2Q9UIW0 290 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
SCARB2-225ENST00000640900 HUWE1Q7Z6Z7 4374 aaKnown RBP6.73□□□□□ -1.33
SCARB2-225ENST00000640900 AGRNO00468 2067 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 MEGF8Q7Z7M0 2845 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 TRBV6-1A0A0K0K1D8 114 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 A0A1B0GV50 99 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 RBFOX3A6NFN3 312 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 OR11H12B2RN74 326 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 NPIPB6E9PJ23 425 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 H3BMM0 161 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 IGLV2-11P01706 119 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 TCRAP04437 139 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 HLA-DRB4P13762 266 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 ATP5G3P48201 142 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 UBE2G2P60604 165 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 RAB14P61106 215 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 MEF2BQ02080 365 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-225ENST00000640900 PSMG4Q5JS54 123 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 GDF5OSQ5U4N7 250 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 AMTNQ6UX39 209 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 OR8A1Q8NGG7 326 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 C2CD4CQ8TF44 421 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 HIST1H2BAQ96A08 127 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 RPUSD4Q96CM3 377 aaKnown RBP6.73□□□□□ -1.33
SCARB2-225ENST00000640900 FAM19A4Q96LR4 140 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 RARRES2Q99969 163 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 SMDT1Q9H4I9 107 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 HLA-DRB4X5D2U9 266 aa6.73□□□□□ -1.33
SCARB2-225ENST00000640900 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 RAB19A4D1S5 217 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 C11orf94C9JXX5 98 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 IFNA1P01562 189 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 DEFB1P60022 68 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 ZNF124Q15973 351 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 COX8CQ7Z4L0 72 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 TRPT1Q86TN4 253 aaKnown RBP6.72□□□□□ -1.33
SCARB2-225ENST00000640900 GTSCR1Q86UQ5 136 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 IQCF2Q8IXL9 164 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 EIF4E3Q8N5X7 224 aaKnown RBP6.72□□□□□ -1.33
SCARB2-225ENST00000640900 ZNF738Q8NE65 137 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 ODF3Q96PU9 254 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 PRR25Q96S07 402 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 ATG101Q9BSB4 218 aa6.72□□□□□ -1.33
SCARB2-225ENST00000640900 RBMY1BA6NDE4 496 aaKnown RBP6.71□□□□□ -1.34
SCARB2-225ENST00000640900 RBMY1EA6NEQ0 496 aaKnown RBP6.71□□□□□ -1.34
SCARB2-225ENST00000640900 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
SCARB2-225ENST00000640900 C9JQL5 133 aa6.71□□□□□ -1.34
SCARB2-225ENST00000640900 F6UB75 175 aa6.71□□□□□ -1.34
SCARB2-225ENST00000640900 TMEM250H0YL14 139 aa6.71□□□□□ -1.34
SCARB2-225ENST00000640900 PEX7O00628 323 aa6.71□□□□□ -1.34
SCARB2-225ENST00000640900 PDE6DO43924 150 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms