RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 NUPR1O60356 82 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 DPM2O94777 84 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 IGLC1P0CG04 106 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF48Q96MX3 618 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 Q8N7P7 452 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 COL6A3P12111 3177 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 CD5LO43866 347 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 FOXC1Q12948 553 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 TM4SF20Q53R12 229 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 PRO3102Q9H379 93 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 ZNRD1Q9P1U0 126 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 A0A1B0GXF2 115 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 IGLV2-23P01705 113 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 RPL24P83731 157 aaKnown RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 IGFBPL1Q8WX77 278 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 KIR2DL4Q99706 377 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 PRSS22Q9GZN4 317 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 IGHV2-70DA0A0C4DH43 119 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 A0A0G2JLM5 398 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 hDV102S1A0JD36 115 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 OR11H12B2RN74 326 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF207O43670 478 aaKnown RBP4.44□□□□□ -1.7
SCN3A-210ENST00000640652 IGLL1P15814 213 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 FAM104BQ5XKR9 115 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 LYPD2Q6UXB3 125 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 OR11H1Q8NG94 326 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 OR11H2Q8NH07 326 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 CFAP46Q8IYW2 2715 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 ARMS2P0C7Q2 107 aa4.44□□□□□ -1.7
SCN3A-210ENST00000640652 SH2D1AO60880 128 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SRSF1Q07955 248 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SRSF9Q13242 221 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-210ENST00000640652 RBAKDNA6NC62 111 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 BVES-AS1Q5T3Y7 98 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 LYZL1Q6UWQ5 148 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 C22orf46C9J442 243 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SPRNQ5BIV9 151 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF562Q6V9R5 426 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SYT8Q8NBV8 401 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF503Q96F45 646 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SIVA1O15304 175 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 IGKCP01834 107 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 A0A087X0K7 114 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 FSTL3O95633 263 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 PAX2Q02962 417 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SIGLEC15Q6ZMC9 328 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 C18orf15Q96N68 181 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 UBTD1Q9HAC8 227 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 TPSG1Q9NRR2 321 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 FREM2Q5SZK8 3169 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 M0QZ24 198 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 MLANAQ16655 118 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 C1orf122Q6ZSJ8 110 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 CIDEAO60543 219 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SEM1Q6ZVN7 128 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SPCS1Q9Y6A9 102 aa4.43□□□□□ -1.7
SCN3A-210ENST00000640652 SRSF6Q13247 344 aaKnown RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 DMRTC2Q8IXT2 367 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 FAM168AQ92567 244 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 FOXC2Q99958 501 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 MRPL16Q9NX20 251 aaKnown RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 K7EM74 188 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 SCGB1C2P0DMR2 95 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 PAPPA-AS1Q5QFB9 102 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 GCN1Q92616 2671 aaKnown RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 IGKV2-40A0A087WW87 121 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 A0A1W2PRD5 423 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 A0A1W2PRF3 423 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 A0A1W2PRM7 423 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 PSMB11A5LHX3 300 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 SHISA9B4DS77 424 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 E7EQL1 145 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 K7EMI3 77 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 IGKV2D-40P01614 121 aaPredicted RBP4.42□□□□□ -1.7
SCN3A-210ENST00000640652 THBDP07204 575 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 RHOGP84095 191 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 OCIAD2Q56VL3 154 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 LINC01560Q8TB33 94 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 ASIPP42127 132 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 GTSF1Q8WW33 167 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 SCRT2Q9NQ03 307 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 C19orf71A6NCJ1 209 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 FAM223BA6NKX1 122 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 PROP1O75360 226 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 CTRLP40313 264 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 FAM223AQ8IWN6 122 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 NPBQ8NG41 125 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 VCX2Q9H322 139 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 TMEM160Q9NX00 188 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 F5H697 171 aa4.42□□□□□ -1.7
SCN3A-210ENST00000640652 IGLV2-8P01709 118 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms