RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 RHOBP62745 196 aa19.28■□□□□ 0.68
VEGFA-231ENST00000640499 PDE6HQ13956 83 aa19.28■□□□□ 0.68
VEGFA-231ENST00000640499 EXOC3-AS1Q8N2X6 119 aa19.28■□□□□ 0.68
VEGFA-231ENST00000640499 PSMG3Q9BT73 122 aaPredicted RBP19.28■□□□□ 0.68
VEGFA-231ENST00000640499 M0R2Z0 102 aa19.27■□□□□ 0.68
VEGFA-231ENST00000640499 SPINK13Q1W4C9 94 aa19.27■□□□□ 0.68
VEGFA-231ENST00000640499 ACOT6Q3I5F7 207 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-231ENST00000640499 PLECQ15149 4684 aaKnown RBP19.27■□□□□ 0.68
VEGFA-231ENST00000640499 MIFP14174 115 aa19.26■□□□□ 0.67
VEGFA-231ENST00000640499 RPP25LQ8N5L8 163 aaKnown RBP19.26■□□□□ 0.67
VEGFA-231ENST00000640499 TENM2Q9NT68 2774 aa19.25■□□□□ 0.67
VEGFA-231ENST00000640499 FAM122CQ6P4D5 195 aa19.25■□□□□ 0.67
VEGFA-231ENST00000640499 OR10G4Q8NGN3 311 aa19.25■□□□□ 0.67
VEGFA-231ENST00000640499 OR10G9Q8NGN4 311 aa19.25■□□□□ 0.67
VEGFA-231ENST00000640499 OR10G7Q8NGN6 311 aa19.25■□□□□ 0.67
VEGFA-231ENST00000640499 PHYHIPLQ96FC7 376 aa19.25■□□□□ 0.67
VEGFA-231ENST00000640499 OR7C2O60412 319 aa19.24■□□□□ 0.67
VEGFA-231ENST00000640499 MRPL53Q96EL3 112 aaKnown RBP19.24■□□□□ 0.67
VEGFA-231ENST00000640499 ST6GAL2Q96JF0 529 aa19.24■□□□□ 0.67
VEGFA-231ENST00000640499 IGF2BP2-AS1Q96M15 143 aa19.24■□□□□ 0.67
VEGFA-231ENST00000640499 NEU1Q99519 415 aa19.24■□□□□ 0.67
VEGFA-231ENST00000640499 SACSQ9NZJ4 4579 aa19.24■□□□□ 0.67
VEGFA-231ENST00000640499 BOLA2-SMG1P6H3BVE0 249 aa19.23■□□□□ 0.67
VEGFA-231ENST00000640499 ICAM4Q14773 271 aa19.23■□□□□ 0.67
VEGFA-231ENST00000640499 TRAV12-2A0A075B6T6 113 aa19.22■□□□□ 0.67
VEGFA-231ENST00000640499 HMGB3O15347 200 aaKnown RBP19.22■□□□□ 0.67
VEGFA-231ENST00000640499 SERF2P84101 59 aa19.22■□□□□ 0.67
VEGFA-231ENST00000640499 KIR3DS1Q14943 382 aa19.22■□□□□ 0.67
VEGFA-231ENST00000640499 KHDC3LQ587J8 217 aa19.22■□□□□ 0.67
VEGFA-231ENST00000640499 BAP18Q8IXM2 172 aa19.22■□□□□ 0.67
VEGFA-231ENST00000640499 RYR3Q15413 4870 aa19.22■□□□□ 0.67
VEGFA-231ENST00000640499 IGHV3OR16-12A0A075B7B8 117 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 BORCS7-ASMTA0A0B4J1R7 106 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 HMSDA8MTL9 139 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 NPIPB6E9PJ23 425 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 CT45A10P0DMU9 189 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 TAS2R45P59539 299 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 UBE2L3P68036 154 aaKnown RBP19.21■□□□□ 0.67
VEGFA-231ENST00000640499 KCNRGQ8N5I3 272 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 OR10J6PQ8NGY7 276 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 PRELID1Q9Y255 219 aa19.21■□□□□ 0.67
VEGFA-231ENST00000640499 A0A1W2PPV4 95 aa19.2■□□□□ 0.66
VEGFA-231ENST00000640499 AMBPP02760 352 aa19.2■□□□□ 0.66
VEGFA-231ENST00000640499 PRM2P04554 102 aa19.2■□□□□ 0.66
VEGFA-231ENST00000640499 NANOS2P60321 138 aaKnown RBP19.2■□□□□ 0.66
VEGFA-231ENST00000640499 ERCC8Q13216 396 aa19.2■□□□□ 0.66
VEGFA-231ENST00000640499 TAAR5O14804 337 aa19.19■□□□□ 0.66
VEGFA-231ENST00000640499 RANP62826 216 aaKnown RBP19.19■□□□□ 0.66
VEGFA-231ENST00000640499 ZNF345Q14585 488 aa19.19■□□□□ 0.66
VEGFA-231ENST00000640499 SSX7Q7RTT5 188 aa19.19■□□□□ 0.66
VEGFA-231ENST00000640499 GNPNAT1Q96EK6 184 aaPredicted RBP19.19■□□□□ 0.66
VEGFA-231ENST00000640499 GOLT1BQ9Y3E0 138 aa19.19■□□□□ 0.66
VEGFA-231ENST00000640499 JTBO76095 146 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 STAG3L2P0CL84 134 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 STAG3L3P0CL85 134 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 CDC34P49427 236 aaPredicted RBP19.18■□□□□ 0.66
VEGFA-231ENST00000640499 PMS2P11Q13670 270 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 C11orf45Q8TAV5 145 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 RAB24Q969Q5 203 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 AGPAT4-IT1Q9H0P7 198 aa19.18■□□□□ 0.66
VEGFA-231ENST00000640499 SMIM9A6NGZ8 99 aa19.17■□□□□ 0.66
VEGFA-231ENST00000640499 PQLC2Q6ZP29 291 aa19.17■□□□□ 0.66
VEGFA-231ENST00000640499 Q9H3A6 140 aa19.17■□□□□ 0.66
VEGFA-231ENST00000640499 AAMDCQ9H7C9 122 aa19.17■□□□□ 0.66
VEGFA-231ENST00000640499 CELA1Q9UNI1 258 aa19.17■□□□□ 0.66
VEGFA-231ENST00000640499 IGKV2-40A0A087WW87 121 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-231ENST00000640499 INSP01308 110 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 IGKV2D-40P01614 121 aaPredicted RBP19.16■□□□□ 0.66
VEGFA-231ENST00000640499 MBP02144 154 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 CDKN1BP46527 198 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 ZNF726P1Q15940 193 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 FAM19A4Q96LR4 140 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 PPP1R14DQ9NXH3 145 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 PLA2G2EQ9NZK7 142 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 RYR2Q92736 4967 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 DNAH1Q9P2D7 4330 aa19.16■□□□□ 0.66
VEGFA-231ENST00000640499 ARL14EPLP0DKL9 152 aa19.15■□□□□ 0.66
VEGFA-231ENST00000640499 LYPD1Q8N2G4 141 aa19.15■□□□□ 0.66
VEGFA-231ENST00000640499 SUN5Q8TC36 379 aa19.15■□□□□ 0.66
VEGFA-231ENST00000640499 VGLL1Q99990 258 aa19.15■□□□□ 0.66
VEGFA-231ENST00000640499 ARPC5LQ9BPX5 153 aa19.15■□□□□ 0.66
VEGFA-231ENST00000640499 CXorf65A6NEN9 183 aa19.14■□□□□ 0.65
VEGFA-231ENST00000640499 C9orf47Q6ZRZ4 202 aa19.14■□□□□ 0.65
VEGFA-231ENST00000640499 ODF3Q96PU9 254 aa19.14■□□□□ 0.65
VEGFA-231ENST00000640499 LYSTQ99698 3801 aa19.14■□□□□ 0.65
VEGFA-231ENST00000640499 ZNF705GA8MUZ8 300 aaPredicted RBP19.13■□□□□ 0.65
VEGFA-231ENST00000640499 TCTE3Q8IZS6 198 aa19.13■□□□□ 0.65
VEGFA-231ENST00000640499 GFI1BQ5VTD9 330 aa19.12■□□□□ 0.65
VEGFA-231ENST00000640499 CEMP1Q6PRD7 247 aaPredicted RBP19.12■□□□□ 0.65
VEGFA-231ENST00000640499 PHLDA1Q8WV24 401 aaPredicted RBP19.12■□□□□ 0.65
VEGFA-231ENST00000640499 LINC00477Q96M19 166 aa19.12■□□□□ 0.65
VEGFA-231ENST00000640499 ACTR3CQ9C0K3 210 aaPredicted RBP19.12■□□□□ 0.65
VEGFA-231ENST00000640499 A0A0D9SG52 128 aa19.11■□□□□ 0.65
VEGFA-231ENST00000640499 HBE1P02100 147 aa19.11■□□□□ 0.65
VEGFA-231ENST00000640499 AZU1P20160 251 aa19.11■□□□□ 0.65
VEGFA-231ENST00000640499 GCHFRP30047 84 aa19.11■□□□□ 0.65
VEGFA-231ENST00000640499 TMEM208Q9BTX3 173 aa19.11■□□□□ 0.65
VEGFA-231ENST00000640499 hCG_2014768A0A024R1R8 64 aa19.1■□□□□ 0.65
VEGFA-231ENST00000640499 PGPA6NDG6 321 aa19.1■□□□□ 0.65
VEGFA-231ENST00000640499 C12orf74Q32Q52 190 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms