RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 KTN1-AS1Q86SY8 53 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 PRR15Q8IV56 129 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 ATOH7Q8N100 152 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 EXOC3-AS1Q8N2X6 119 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 C9orf62Q8N4C0 152 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 KCNRGQ8N5I3 272 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 C9orf163Q8N9P6 203 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 OR5D16Q8NGK9 328 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 OR5D14Q8NGL3 314 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 OR10AC1Q8NH08 325 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 BRK1Q8WUW1 75 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TEX37Q96LM6 180 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF714Q96N38 554 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 CIB3Q96Q77 187 aaPredicted RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 OR4C12Q96R67 309 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 GPX7Q96SL4 187 aaPredicted RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 DERL1Q9BUN8 251 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 BANF2Q9H503 90 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 CBLN4Q9NTU7 201 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 BOKQ9UMX3 212 aaPredicted RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 FUT9Q9Y231 359 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 RRBP1Q9P2E9 1410 aaKnown RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 ARFGEF3Q5TH69 2177 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 BAZ1AQ9NRL2 1556 aaPredicted RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 GRIN2AQ12879 1464 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 SCAF11Q99590 1463 aaKnown RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 ARHGEF11O15085 1522 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 TRGV2A0A075B6R0 118 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 A0A087X0T9 212 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 TRGV10A0A0A0MS01 117 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 IGHV1-58A0A0C4DH39 117 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 A0A0D9SEW6 157 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 LOC107984640A0A0U1RRK4 108 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 C7orf71A4D174 169 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 OR51F1A6NGY5 319 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF670-ZNF695F2Z2N8 137 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 H3BMG7 143 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 H7BYZ3 331 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 CCL25O15444 150 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 CREBL2O60519 120 aaPredicted RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 YPEL1O60688 119 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 PMP2P02689 132 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 MT-ND4LP03901 98 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 MT-ND6P03923 174 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 PRM2P04554 102 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 CD2P06729 351 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 CD14P08571 375 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 LINC00032P0C843 101 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 LINC00694P0DN24 101 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 CRYGSP22914 178 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 RPL22P35268 128 aaKnown RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H4AP62805 103 aaKnown RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 UBA52P62987 128 aaKnown RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 UBE2BP63146 152 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 AADACL3Q5VUY0 350 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 MRPL54Q6P161 138 aaKnown RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 IZUMO2Q6UXV1 221 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 LCA10Q71F78 164 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 GKN2Q86XP6 184 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 H1FXQ92522 213 aaKnown RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 MCEEQ96PE7 176 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 ERMAPQ96PL5 475 aaPredicted RBP1.12□□□□□ -2.23
CCDC7-216ENST00000640058 SNHG12Q9BXW3 62 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 CYSTM1Q9H1C7 97 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 NAA60Q9H7X0 242 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 RNF122Q9H9V4 155 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 SAR1AQ9NR31 198 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 IER3IP1Q9Y5U9 82 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 ALPK2Q86TB3 2170 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 MYOM3Q5VTT5 1437 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 TRAPPC8Q9Y2L5 1435 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 KDM5CP41229 1560 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 DOCK5Q9H7D0 1870 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 ABCC10Q5T3U5 1492 aa1.12□□□□□ -2.23
CCDC7-216ENST00000640058 MAPKBP1O60336 1514 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TRAV27A0A087WT01 109 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 PIGBOS1A0A0B4J2F0 54 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TRBV7-6A0A0J9YX20 115 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM262E9PQX1 116 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 H3BQF6 201 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 APOC4-APOC2K7ER74 178 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BKO60814 126 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TNFP01375 233 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 APOC2P02655 101 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 RBP4P02753 201 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BJP06899 126 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 SPINK8P0C7L1 97 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 PYYP10082 97 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 DEFA4P12838 97 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 IFITM1P13164 125 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 FABP4P15090 132 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 FKBP2P26885 142 aaKnown RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 BRS3P32247 399 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 HBBP68871 147 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 CCL20P78556 96 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 RHOGP84095 191 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 PLGLB1Q02325 96 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF846Q147U1 533 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM155Q4W5P6 130 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms