RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 Q96MF0 132 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 RABAC1Q9UI14 185 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 PRRC2AP48634 2157 aaKnown RBP11.72□□□□□ -0.53
TRIM3-215ENST00000639856 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
TRIM3-215ENST00000639856 HBBP68871 147 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 RBPMS2Q6ZRY4 209 aaKnown RBP11.72□□□□□ -0.53
TRIM3-215ENST00000639856 Q71RC1 249 aaPredicted RBP11.72□□□□□ -0.53
TRIM3-215ENST00000639856 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 ZNF502Q8TBZ5 544 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 KCNS1Q96KK3 526 aa11.72□□□□□ -0.53
TRIM3-215ENST00000639856 NOL4LQ96MY1 436 aaPredicted RBP11.72□□□□□ -0.53
TRIM3-215ENST00000639856 A0A1W2PS18 150 aa11.71□□□□□ -0.53
TRIM3-215ENST00000639856 ZNF785A8K8V0 405 aa11.71□□□□□ -0.53
TRIM3-215ENST00000639856 A8MWP6 167 aa11.71□□□□□ -0.53
TRIM3-215ENST00000639856 CD33P20138 364 aa11.71□□□□□ -0.53
TRIM3-215ENST00000639856 ZC2HC1AQ96GY0 325 aa11.71□□□□□ -0.53
TRIM3-215ENST00000639856 RHOGP84095 191 aa11.71□□□□□ -0.54
TRIM3-215ENST00000639856 PSG9Q00887 426 aa11.71□□□□□ -0.54
TRIM3-215ENST00000639856 PGLYRP4Q96LB8 373 aa11.71□□□□□ -0.54
TRIM3-215ENST00000639856 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.54
TRIM3-215ENST00000639856 ITPR2Q14571 2701 aa11.7□□□□□ -0.54
TRIM3-215ENST00000639856 TLN2Q9Y4G6 2542 aa11.7□□□□□ -0.54
TRIM3-215ENST00000639856 GPR183P32249 361 aa11.7□□□□□ -0.54
TRIM3-215ENST00000639856 OR2D3Q8NGH3 330 aa11.7□□□□□ -0.54
TRIM3-215ENST00000639856 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
TRIM3-215ENST00000639856 LINC00527Q9UJ94 153 aa11.7□□□□□ -0.54
TRIM3-215ENST00000639856 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 A6NDX4 124 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 S100A7P31151 101 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 AMTP48728 403 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 ALKBH7Q9BT30 221 aaPredicted RBP11.69□□□□□ -0.54
TRIM3-215ENST00000639856 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
TRIM3-215ENST00000639856 CSN1S1P47710 185 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
TRIM3-215ENST00000639856 KLF5Q13887 457 aaPredicted RBP11.69□□□□□ -0.54
TRIM3-215ENST00000639856 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 ARL6IP6Q8N6S5 226 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
TRIM3-215ENST00000639856 MXRA5Q9NR99 2828 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 IGHV3-35A0A0C4DH35 117 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 ZNF705FA8MVS1 300 aaPredicted RBP11.68□□□□□ -0.54
TRIM3-215ENST00000639856 J3QLI3 93 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 CLEC3BP05452 202 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
TRIM3-215ENST00000639856 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
TRIM3-215ENST00000639856 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 PDZD2O15018 2839 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
TRIM3-215ENST00000639856 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
TRIM3-215ENST00000639856 PMCHP20382 165 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 DEFB112Q30KQ8 113 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 ASCL2Q99929 193 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
TRIM3-215ENST00000639856 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
TRIM3-215ENST00000639856 CRIP1P50238 77 aa11.67□□□□□ -0.54
TRIM3-215ENST00000639856 SSTP61278 116 aa11.67□□□□□ -0.54
TRIM3-215ENST00000639856 C1orf194Q5T5A4 169 aa11.67□□□□□ -0.54
TRIM3-215ENST00000639856 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
TRIM3-215ENST00000639856 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 APOHP02749 345 aaPredicted RBP11.66□□□□□ -0.54
TRIM3-215ENST00000639856 BLCAPP62952 87 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 Q6ZS46 218 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 WFDC11Q8NEX6 87 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 A0A1B0GV90 55 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 HAX1O00165 279 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 RAB9AP51151 201 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 C19orf54Q5BKX5 351 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 CLEC19AQ6UXS0 136 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 EEF1AKMT3Q96AZ1 226 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 NDUFAF3Q9BU61 184 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 RNF114Q9Y508 228 aa11.66□□□□□ -0.54
TRIM3-215ENST00000639856 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
TRIM3-215ENST00000639856 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.54
TRIM3-215ENST00000639856 IGHV4-59P01825 116 aa11.65□□□□□ -0.54
TRIM3-215ENST00000639856 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
TRIM3-215ENST00000639856 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
TRIM3-215ENST00000639856 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.55
TRIM3-215ENST00000639856 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.55
TRIM3-215ENST00000639856 CHEK1O14757 476 aa11.65□□□□□ -0.55
TRIM3-215ENST00000639856 BUB3O43684 328 aa11.65□□□□□ -0.55
TRIM3-215ENST00000639856 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.55
TRIM3-215ENST00000639856 KRTDAPP60985 99 aa11.65□□□□□ -0.55
TRIM3-215ENST00000639856 PRSS57Q6UWY2 283 aa11.65□□□□□ -0.55
TRIM3-215ENST00000639856 NIT1Q86X76 327 aa11.65□□□□□ -0.55
TRIM3-215ENST00000639856 FAM19A2Q8N3H0 131 aa11.65□□□□□ -0.55
TRIM3-215ENST00000639856 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
TRIM3-215ENST00000639856 FSHBP01225 129 aa11.64□□□□□ -0.55
TRIM3-215ENST00000639856 IGHG4P01861 327 aa11.64□□□□□ -0.55
TRIM3-215ENST00000639856 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
TRIM3-215ENST00000639856 COX8CQ7Z4L0 72 aa11.64□□□□□ -0.55
TRIM3-215ENST00000639856 HECTD1Q9ULT8 2610 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms