RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ATP5EP56381 51 aaPredicted RBP12.42□□□□□ -0.42
UBE3A-227ENST00000638011 FAM231DQ6ZW35 169 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 CYTL1Q9NRR1 136 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 SS18L2Q9UHA2 77 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 CRLF1O75462 422 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 CDKN1AP38936 164 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 LY6EQ16553 131 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
UBE3A-227ENST00000638011 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 ATP6V0E2Q8NHE4 81 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 SVIPQ8NHG7 77 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 ORMDL1Q9P0S3 153 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 WFDC1Q9HC57 220 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 SHISA3A0PJX4 238 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 WDR87Q6ZQQ6 2873 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 GATA2P23769 480 aaPredicted RBP12.41□□□□□ -0.42
UBE3A-227ENST00000638011 PRSS22Q9GZN4 317 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 A0A1W2PR77 199 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 SUPT4H1P63272 117 aaKnown RBP12.41□□□□□ -0.42
UBE3A-227ENST00000638011 A0A1W2PPI3 338 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 FDCSPQ8NFU4 85 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 TAX1BP3O14907 124 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
UBE3A-227ENST00000638011 C15orf32Q32M92 178 aa12.41□□□□□ -0.42
UBE3A-227ENST00000638011 ADAMTS7Q9UKP4 1686 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 KIAA1671Q9BY89 1806 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 HERVK_113P63121 156 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 F8P00451 2351 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 MINOS1Q5TGZ0 78 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 MINOS1-NBL1R4GNA1 71 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 EXOC3-AS1Q8N2X6 119 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 V9GYY9 64 aa12.4□□□□□ -0.42
UBE3A-227ENST00000638011 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 MORN5Q5VZ52 161 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 FAM168AQ92567 244 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 KIR2DL5BA0A0G2JN68 375 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 KIR2DL5BA0A0G2JPC4 375 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 KIR2DL5AQ8N109 375 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 COX6A1P12074 109 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 Q86TA4 180 aa12.39□□□□□ -0.43
UBE3A-227ENST00000638011 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 CHKB-CPT1BH3BT56 60 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 IGKV1D-13A0A0B4J2D9 117 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 IGKV1-13P0DP09 117 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 IL15RAQ13261 267 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 CCL4P13236 92 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 PDE6GP18545 87 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 C20orf78Q9BR46 151 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 CECR9P0C854 216 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
UBE3A-227ENST00000638011 ZNF561-AS1K7EIQ3 104 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 DEFB124Q8NES8 71 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 TRBV25-1A0A075B6N4 114 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
UBE3A-227ENST00000638011 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
UBE3A-227ENST00000638011 PPP1R32Q7Z5V6 425 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 H0YGX0 51 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 PYGO2Q9BRQ0 406 aa12.37□□□□□ -0.43
UBE3A-227ENST00000638011 YPEL3P61236 119 aaPredicted RBP12.37□□□□□ -0.43
UBE3A-227ENST00000638011 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
UBE3A-227ENST00000638011 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 PFN1P07737 140 aaKnown RBP12.36□□□□□ -0.43
UBE3A-227ENST00000638011 CSRP3P50461 194 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 DEFB123Q8N688 67 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 A0A1B0GX51 115 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 IGHV3-23P01764 117 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 TIAF1O95411 115 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 WNT2P09544 360 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 HERV-K104P63124 156 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 BSPH1Q075Z2 132 aa12.36□□□□□ -0.43
UBE3A-227ENST00000638011 TRGV1A0A0A0MS02 117 aa12.35□□□□□ -0.43
UBE3A-227ENST00000638011 PSG7Q13046 419 aa12.35□□□□□ -0.43
UBE3A-227ENST00000638011 FAM219BQ5XKK7 198 aa12.35□□□□□ -0.43
UBE3A-227ENST00000638011 Q6ZWC4 215 aa12.35□□□□□ -0.43
UBE3A-227ENST00000638011 CHCHD2Q9Y6H1 151 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-227ENST00000638011 IL9P15248 144 aa12.35□□□□□ -0.43
UBE3A-227ENST00000638011 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
UBE3A-227ENST00000638011 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-227ENST00000638011 RHOHQ15669 191 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 WBP1Q96G27 269 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 THAP8Q8NA92 274 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 ZNF474Q6S9Z5 364 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-227ENST00000638011 BRK1Q8WUW1 75 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 SEC61GP60059 68 aa12.34□□□□□ -0.43
UBE3A-227ENST00000638011 IGLV3-32A0A0A0MS00 114 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms