RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	UBE2L3	P68036	154 aa	Known RBP	6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	ODF3L2	Q3SX64	289 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	PSMG4	Q5JS54	123 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	LYPD1	Q8N2G4	141 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	TMED6	Q8WW62	240 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	RAB24	Q969Q5	203 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	FAM167A-AS1	Q96KT0	104 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	LINC00052	Q96N35	136 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	TMEM167B	Q9NRX6	74 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	UBQLN2	Q9UHD9	624 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	PRELID1	Q9Y255	219 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	RFNG	Q9Y644	331 aa		6.97	□□□□□ -1.29
CACNA1A-256	ENST00000637981	TRBV19	A0A075B6N1	114 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SOCS3	O14543	225 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SPRY2	O43597	315 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	PYY	P10082	97 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	NKX2-5	P52952	324 aa	Predicted RBP	6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	FAM74A1	Q5RGS3	127 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	LGALS9C	Q6DKI2	356 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	EBLN2	Q6P2I7	272 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ZNF331	Q9NQX6	463 aa	Predicted RBP	6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	TP53TG1	Q9Y2A0	90 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981	PCLO	Q9Y6V0	5065 aa		6.96	□□□□□ -1.3
CACNA1A-256	ENST00000637981		H3BQ15	152 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	OR10J4	P0C629	311 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ARL14EPL	P0DKL9	152 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	NUTF2	P61970	127 aa	Known RBP	6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	PSG3	Q16557	428 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	DEFB135	Q30KP9	77 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	FOXI2	Q6ZQN5	318 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981		Q6ZWC4	215 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	STH	Q8IWL8	128 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	FAM213B	Q8TBF2	198 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	BLNK	Q8WV28	456 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	FXYD5	Q96DB9	178 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	MRPL53	Q96EL3	112 aa	Known RBP	6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SAT2	Q96F10	170 aa	Predicted RBP	6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ZNF586	Q9NXT0	402 aa		6.95	□□□□□ -1.3
CACNA1A-256	ENST00000637981	AGRN	O00468	2067 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	MAP1LC3B2	A6NCE7	125 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	DUSP14	O95147	198 aa	Known RBP	6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	HBE1	P02100	147 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	H2AFB1	P0C5Y9	115 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	GCHFR	P30047	84 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	CSN1S1	P47710	185 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SULT1A2	P50226	295 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	PPT1	P50897	306 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	APOC4	P55056	127 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	APRG1	Q8IVJ8	170 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	IQCF2	Q8IXL9	164 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	FAM24B	Q8N5W8	94 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ZNF738	Q8NE65	137 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	RXFP4	Q8TDU9	374 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	C17orf77	Q96MU5	243 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	NKX6-2	Q9C056	277 aa	Predicted RBP	6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	MAP1LC3B	Q9GZQ8	125 aa		6.94	□□□□□ -1.3
CACNA1A-256	ENST00000637981	TRAV8-2	A0A0B4J237	113 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	KIR2DL5B	A0A0G2JN68	375 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	KIR2DL5B	A0A0G2JPC4	375 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	UBE2C	O00762	179 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	HMGB3	O15347	200 aa	Known RBP	6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	HLA-DRB4	P13762	266 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	RAN	P62826	216 aa	Known RBP	6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ACTL10	Q5JWF8	245 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	KIR2DL5A	Q8N109	375 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ARL6IP6	Q8N6S5	226 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	KIR2DL5B	Q8NHK3	375 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	CMTM2	Q8TAZ6	248 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SUN5	Q8TC36	379 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SFT2D1	Q8WV19	159 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	MBD3L1	Q8WWY6	194 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	RPUSD4	Q96CM3	377 aa	Known RBP	6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ZNF503	Q96F45	646 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	CLUHP3	Q96NS8	147 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SAV1	Q9H4B6	383 aa	Predicted RBP	6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981	HLA-DRB4	X5D2U9	266 aa		6.93	□□□□□ -1.3
CACNA1A-256	ENST00000637981		H3BTX0	84 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	BOLA2-SMG1P6	H3BVE0	249 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SLC17A3	O00476	420 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	NDUFB4	O95168	129 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	SNRPC	P09234	159 aa	Known RBP	6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	BLOC1S1	P78537	153 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ICAM4	Q14773	271 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ZNF726P1	Q15940	193 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	MORN3	Q6PF18	240 aa	Predicted RBP	6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	RNF182	Q8N6D2	247 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	OR10J6P	Q8NGY7	276 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	RNF183	Q96D59	192 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	C1QTNF4	Q9BXJ3	329 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981		Q9H3A6	140 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	OTOR	Q9NRC9	128 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	PPP1R14D	Q9NXH3	145 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ARL2-SNX15	V9GYD0	113 aa		6.92	□□□□□ -1.3
CACNA1A-256	ENST00000637981	TRAV1-1	A0A0B4J248	108 aa		6.91	□□□□□ -1.3
CACNA1A-256	ENST00000637981		A0A0J9YX75	114 aa		6.91	□□□□□ -1.3
CACNA1A-256	ENST00000637981		A0A1W2PRE2	83 aa		6.91	□□□□□ -1.3
CACNA1A-256	ENST00000637981	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.91	□□□□□ -1.3
CACNA1A-256	ENST00000637981		H3BMM0	161 aa		6.91	□□□□□ -1.3
CACNA1A-256	ENST00000637981		K7EQM0	130 aa		6.91	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms