RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
CACNA1A-242ENST00000637485 UNQ6494/PRO21346Q6UXR6 183 aa7.87□□□□□ -1.15
CACNA1A-242ENST00000637485 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
CACNA1A-242ENST00000637485 TSC2P49815 1807 aa7.87□□□□□ -1.15
CACNA1A-242ENST00000637485 WDR81Q562E7 1941 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 C15orf62A8K5M9 175 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 UQCRQO14949 82 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 COX6B1P14854 86 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 RPL15P61313 204 aaKnown RBP7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 ZIC4Q8N9L1 334 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 TMEM213A2RRL7 107 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 DAD1P61803 113 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 CR1LQ2VPA4 569 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 C9orf106Q8NAJ2 232 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 NEU4Q8WWR8 484 aaPredicted RBP7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 SCN2AQ99250 2005 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 NDUFS7O75251 213 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 NDUFV3P56181 108 aaKnown RBP7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 SSC4DQ8WTU2 575 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 ZNF747Q9BV97 191 aa7.86□□□□□ -1.15
CACNA1A-242ENST00000637485 PAX8Q06710 450 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 RSPO4Q2I0M5 234 aaPredicted RBP7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 WIPF2Q8TF74 440 aaPredicted RBP7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 DNAJC13O75165 2243 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 RNASE2P10153 161 aaKnown RBP7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 MP68P56378 58 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 FAM27E3Q08E93 113 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 SCRT2Q9NQ03 307 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 SCN8AQ9UQD0 1980 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 TRBV6-6A0A0A6YYG2 114 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 Q6ZS49 121 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 SRRM4A7MD48 611 aaKnown RBP7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 RHODO00212 210 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 EFNA2O43921 213 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 C20orf173Q96LM9 149 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 GBF1Q92538 1859 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 Q8TAT8 98 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 BAALCQ8WXS3 180 aa7.85□□□□□ -1.15
CACNA1A-242ENST00000637485 A0A087WV48 116 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 FOXF2Q12947 444 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 C3orf56Q8N813 242 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 HIGD1BQ9P298 99 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 TRAV25A0A0B4J276 109 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 CD59P13987 128 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 GGNQ86UU5 652 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 TMEM133Q9H2Q1 129 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 I3L3M4 83 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 CELA3BP08861 270 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 BSPH1Q075Z2 132 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 HS3ST6Q96QI5 342 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 TRBV25-1A0A075B6N4 114 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 ZNF493Q6ZR52 646 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 LINC00479Q96M42 142 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 DKK2Q9UBU2 259 aa7.84□□□□□ -1.15
CACNA1A-242ENST00000637485 PINLYPA6NC86 204 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 C17orf100A8MU93 164 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 LINC00527Q9UJ94 153 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 Q6ZUT4 128 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 C11orf52Q96A22 123 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 RNF5Q99942 180 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 NDUFC2-KCTD14E9PQ53 114 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 CXCL5P42830 114 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 CYYR1Q96J86 154 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 PYGO2Q9BRQ0 406 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 SPRR3Q9UBC9 169 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 PRB3Q04118 309 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 Q71RC1 249 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 PCP2Q8IVA1 136 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 LINC01560Q8TB33 94 aa7.83□□□□□ -1.16
CACNA1A-242ENST00000637485 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 K7EMI3 77 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 HTN3P15516 51 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 H3BT86 120 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 SMIM2Q9BVW6 85 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 IGKV1-12A0A0C4DH73 117 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 M0R1W7 72 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 IGKV1D-12P01611 117 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 IGHV3-11P01762 117 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 C1orf195Q5TG92 126 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 PTH2Q96A98 100 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 C22orf46C9J442 243 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 PF4P02776 101 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 THBDP07204 575 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 CRYGBP07316 175 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 DEFB104AQ8WTQ1 72 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 RNF166Q96A37 237 aaPredicted RBP7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 C20orf78Q9BR46 151 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 SHANK2-AS3Q9BTD1 123 aa7.82□□□□□ -1.16
CACNA1A-242ENST00000637485 CLPSL1A2RUU4 121 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms