RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 C20orf144Q9BQM9 153 aa13.47□□□□□ -0.25
CLN6-213ENST00000636212 H7BYZ3 331 aa13.46□□□□□ -0.25
CLN6-213ENST00000636212 SLC17A3O00476 420 aa13.46□□□□□ -0.25
CLN6-213ENST00000636212 DEFB130BP0DP73 79 aa13.46□□□□□ -0.25
CLN6-213ENST00000636212 DEFB130AP0DP74 79 aa13.46□□□□□ -0.25
CLN6-213ENST00000636212 NMES1Q9C002 83 aa13.46□□□□□ -0.25
CLN6-213ENST00000636212 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 H3BQ15 152 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 ZNF253O75346 499 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 PRB4P10163 310 aaPredicted RBP13.45□□□□□ -0.26
CLN6-213ENST00000636212 TMEM88Q6PEY1 159 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 ZNF493Q6ZR52 646 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 CCDC28AQ8IWP9 274 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 C15orf53Q8NAA6 179 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 SAT2Q96F10 170 aaPredicted RBP13.45□□□□□ -0.26
CLN6-213ENST00000636212 KCNIP2Q9NS61 270 aa13.45□□□□□ -0.26
CLN6-213ENST00000636212 SIX6O95475 246 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 PRM2P04554 102 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 LEPP41159 167 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 LINC00336Q6ZUF6 198 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 TIMM9Q9Y5J7 89 aa13.44□□□□□ -0.26
CLN6-213ENST00000636212 TIMM8BQ9Y5J9 83 aaPredicted RBP13.44□□□□□ -0.26
CLN6-213ENST00000636212 ATP5G1P05496 136 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 AZU1P20160 251 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 ATP5G3P48201 142 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 NHLH2Q02577 135 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 RNF212Q495C1 297 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 OR5C1Q8NGR4 320 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 ZNF586Q9NXT0 402 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 TMEM14CQ9P0S9 112 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 PRELID1Q9Y255 219 aa13.43□□□□□ -0.26
CLN6-213ENST00000636212 PRAC2D3DTV9 90 aa13.42□□□□□ -0.26
CLN6-213ENST00000636212 HIST1H1EP10412 219 aaKnown RBP13.42□□□□□ -0.26
CLN6-213ENST00000636212 PDE6HQ13956 83 aa13.42□□□□□ -0.26
CLN6-213ENST00000636212 TMEM263Q8WUH6 116 aaKnown RBP13.42□□□□□ -0.26
CLN6-213ENST00000636212 MRPL53Q96EL3 112 aaKnown RBP13.42□□□□□ -0.26
CLN6-213ENST00000636212 ODF3Q96PU9 254 aa13.42□□□□□ -0.26
CLN6-213ENST00000636212 AAMDCQ9H7C9 122 aa13.42□□□□□ -0.26
CLN6-213ENST00000636212 TRBV19A0A075B6N1 114 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 CBY3A6NI87 242 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 C17orf112F2Z3M2 114 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 F5H768 121 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 SSNA1O43805 119 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 PET100P0DJ07 73 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 THAP6Q8TBB0 222 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 ATG101Q9BSB4 218 aa13.41□□□□□ -0.26
CLN6-213ENST00000636212 KMT2AQ03164 3969 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 NPIPB6E9PJ23 425 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 J3KRW8 73 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 M0R2N4 97 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 CLINT1Q14677 625 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 RGS21Q2M5E4 152 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 GFI1BQ5VTD9 330 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 BLNKQ8WV28 456 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 PARD6GQ9BYG4 376 aaPredicted RBP13.4□□□□□ -0.26
CLN6-213ENST00000636212 OR5AC2Q9NZP5 309 aa13.4□□□□□ -0.26
CLN6-213ENST00000636212 PLAC8L1A1L4L8 177 aa13.39□□□□□ -0.27
CLN6-213ENST00000636212 SNURFLB1AK76 121 aa13.39□□□□□ -0.27
CLN6-213ENST00000636212 FCN2Q15485 313 aa13.39□□□□□ -0.27
CLN6-213ENST00000636212 LGALS9BQ3B8N2 356 aa13.39□□□□□ -0.27
CLN6-213ENST00000636212 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
CLN6-213ENST00000636212 CT45A10P0DMU9 189 aa13.38□□□□□ -0.27
CLN6-213ENST00000636212 PYYP10082 97 aa13.38□□□□□ -0.27
CLN6-213ENST00000636212 FAM3BP58499 235 aaPredicted RBP13.38□□□□□ -0.27
CLN6-213ENST00000636212 RNASE8Q8TDE3 154 aaKnown RBP13.38□□□□□ -0.27
CLN6-213ENST00000636212 PPP1R1CQ8WVI7 109 aa13.38□□□□□ -0.27
CLN6-213ENST00000636212 MRPL32Q9BYC8 188 aaKnown RBP13.38□□□□□ -0.27
CLN6-213ENST00000636212 IGLV2-18A0A075B6J9 118 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 TRAV12-3A0A0B4J271 114 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
CLN6-213ENST00000636212 KIR3DS1Q14943 382 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 GCSAMLQ5JQS6 135 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 SOHLH1Q5JUK2 328 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 LINC00477Q96M19 166 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 WDR61Q9GZS3 305 aaKnown RBP13.37□□□□□ -0.27
CLN6-213ENST00000636212 ALG5Q9Y673 324 aa13.37□□□□□ -0.27
CLN6-213ENST00000636212 M0R3E3 92 aa13.36□□□□□ -0.27
CLN6-213ENST00000636212 NUDT3O95989 172 aa13.36□□□□□ -0.27
CLN6-213ENST00000636212 ATP5SQ99766 215 aa13.36□□□□□ -0.27
CLN6-213ENST00000636212 SLC25A2Q9BXI2 301 aa13.36□□□□□ -0.27
CLN6-213ENST00000636212 OR51M1Q9H341 326 aa13.36□□□□□ -0.27
CLN6-213ENST00000636212 H0YIZ8 118 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 NDUFB4O95168 129 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 IFNA5P01569 189 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 H2BFSP57053 126 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 PAXXQ9BUH6 204 aa13.35□□□□□ -0.27
CLN6-213ENST00000636212 C7orf71A4D174 169 aa13.34□□□□□ -0.27
CLN6-213ENST00000636212 MPC2O95563 127 aa13.34□□□□□ -0.27
CLN6-213ENST00000636212 ERCC8Q13216 396 aa13.34□□□□□ -0.27
CLN6-213ENST00000636212 ICAM4Q14773 271 aa13.34□□□□□ -0.27
CLN6-213ENST00000636212 EXOC3-AS1Q8N2X6 119 aa13.34□□□□□ -0.27
CLN6-213ENST00000636212 FUT9Q9Y231 359 aa13.34□□□□□ -0.27
CLN6-213ENST00000636212 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms