RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 C2CD4CQ8TF44 421 aa7.19□□□□□ -1.26
CACNA1A-223ENST00000636058 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
CACNA1A-223ENST00000636058 SPAG8Q99932 426 aaPredicted RBP7.19□□□□□ -1.26
CACNA1A-223ENST00000636058 ATG101Q9BSB4 218 aa7.19□□□□□ -1.26
CACNA1A-223ENST00000636058 PRELID1Q9Y255 219 aa7.19□□□□□ -1.26
CACNA1A-223ENST00000636058 IZUMO1RA6ND01 250 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 KRBOX1C9JBD0 128 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 DIRC3C9JPN6 131 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 ADCYAP1P18509 176 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 CD33P20138 364 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 TFPI2P48307 235 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 INSL3P51460 131 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 RIPPLY3P57055 190 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 PSG3Q16557 428 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 LCN12Q6JVE5 192 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 WFDC3Q8IUB2 231 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 FAM24BQ8N5W8 94 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 DERL1Q9BUN8 251 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 MCRIP2Q9BUT9 160 aaKnown RBP7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 PARLQ9H300 379 aa7.18□□□□□ -1.26
CACNA1A-223ENST00000636058 SERTM2A0A1B0GWG4 89 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 OR4C46A6NHA9 309 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 ZNF705FA8MVS1 300 aaPredicted RBP7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 PRAC2D3DTV9 90 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 ID1P41134 155 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 CSN1S1P47710 185 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 CEBPGP53567 150 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 SNRPD3P62318 126 aaKnown RBP7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 SOHLH1Q5JUK2 328 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 C10orf91Q5T1B1 145 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 C9orf66Q5T8R8 295 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 RPUSD4Q96CM3 377 aaKnown RBP7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 LINC00052Q96N35 136 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 RPH3ALQ9UNE2 315 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 ZNF256Q9Y2P7 627 aaPredicted RBP7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 KLF12Q9Y4X4 402 aa7.17□□□□□ -1.26
CACNA1A-223ENST00000636058 COL6A5A8TX70 2615 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 F8W036 122 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 WIPF1O43516 503 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 IGLV2-11P01706 119 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 ZNF688P0C7X2 276 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 AKR1C3P42330 323 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 RPL35P42766 123 aaKnown RBP7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 CNN1P51911 297 aaKnown RBP7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 FAM74A3Q4VXF1 159 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 GOLT1AQ6ZVE7 132 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 ZNF738Q8NE65 137 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 SEC11CQ9BY50 192 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 STAB1Q9NY15 2570 aa7.16□□□□□ -1.26
CACNA1A-223ENST00000636058 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 IGKV2-40A0A087WW87 121 aaPredicted RBP7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 TRBV6-1A0A0K0K1D8 114 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 ZNF727A8MUV8 499 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 C9JCJ5 164 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 K7EQM0 130 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 IGKV2D-40P01614 121 aaPredicted RBP7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 S100A9P06702 114 aaKnown RBP7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 PRB4P10163 310 aaPredicted RBP7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 TAS2R60P59551 318 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 GUCA2BQ16661 112 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 ZNF674Q2M3X9 581 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 PSMG4Q5JS54 123 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 SMIM7Q9BQ49 75 aa7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 CARHSP1Q9Y2V2 147 aaKnown RBP7.15□□□□□ -1.26
CACNA1A-223ENST00000636058 TRAV8-1A0A0A6YYK1 113 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 FBLL1A6NHQ2 334 aaKnown RBP7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 VWFP04275 2813 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 IGLL1P15814 213 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 DEFB1P60022 68 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 UBE2G1P62253 170 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 BEAN1Q3B7T3 259 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 ODF3L2Q3SX64 289 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 CENPWQ5EE01 88 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 C9orf47Q6ZRZ4 202 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 Q86TA4 180 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 SGK494Q96LW2 274 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 IGF2BP2-AS1Q96M15 143 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 VGLL1Q99990 258 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 NIPSNAP3BQ9BS92 247 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 MAP6D1Q9H9H5 199 aa7.14□□□□□ -1.27
CACNA1A-223ENST00000636058 NPIPB6E9PJ23 425 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 F6UB75 175 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 LTAP01374 205 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 GNG4P50150 75 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 DEFB131AP59861 70 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 FLI1Q01543 452 aaPredicted RBP7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 TMEM241Q24JQ0 296 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 OR8A1Q8NGG7 326 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 OR10J6PQ8NGY7 276 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 FAM110AQ9BQ89 295 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
CACNA1A-223ENST00000636058 SAV1Q9H4B6 383 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms