RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 RPP25LQ8N5L8 163 aaKnown RBP11.32□□□□□ -0.6
CLN6-211ENST00000635754 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
CLN6-211ENST00000635754 FXYD5Q96DB9 178 aa11.32□□□□□ -0.6
CLN6-211ENST00000635754 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
CLN6-211ENST00000635754 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
CLN6-211ENST00000635754 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
CLN6-211ENST00000635754 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
CLN6-211ENST00000635754 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
CLN6-211ENST00000635754 ZNF471Q9BX82 626 aaPredicted RBP11.31□□□□□ -0.6
CLN6-211ENST00000635754 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
CLN6-211ENST00000635754 PRELID1Q9Y255 219 aa11.31□□□□□ -0.6
CLN6-211ENST00000635754 A8MTW9 85 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLN6-211ENST00000635754 FXYD7P58549 80 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 TMUB2Q71RG4 321 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 OR10J6PQ8NGY7 276 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 RARRES2Q99969 163 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
CLN6-211ENST00000635754 SLC35B3Q9H1N7 401 aa11.3□□□□□ -0.6
CLN6-211ENST00000635754 A0A1B0GVG6 124 aa11.29□□□□□ -0.6
CLN6-211ENST00000635754 HMGB3O15347 200 aaKnown RBP11.29□□□□□ -0.6
CLN6-211ENST00000635754 PRB4P10163 310 aaPredicted RBP11.29□□□□□ -0.6
CLN6-211ENST00000635754 EIF5AP63241 154 aaKnown RBP11.29□□□□□ -0.6
CLN6-211ENST00000635754 EXOC3-AS1Q8N2X6 119 aa11.29□□□□□ -0.6
CLN6-211ENST00000635754 OR11H2Q8NH07 326 aa11.29□□□□□ -0.6
CLN6-211ENST00000635754 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
CLN6-211ENST00000635754 HYLS1Q96M11 299 aa11.29□□□□□ -0.6
CLN6-211ENST00000635754 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
CLN6-211ENST00000635754 M0R3E3 92 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 ICAM4Q14773 271 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 AMTNQ6UX39 209 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
CLN6-211ENST00000635754 PRAC2D3DTV9 90 aa11.27□□□□□ -0.6
CLN6-211ENST00000635754 BOLA2-SMG1P6H3BVE0 249 aa11.27□□□□□ -0.6
CLN6-211ENST00000635754 AMBPP02760 352 aa11.27□□□□□ -0.6
CLN6-211ENST00000635754 RANP62826 216 aaKnown RBP11.27□□□□□ -0.6
CLN6-211ENST00000635754 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.6
CLN6-211ENST00000635754 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 M0R2Z0 102 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 CXorf1O96002 111 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 TPT1P13693 172 aaKnown RBP11.26□□□□□ -0.61
CLN6-211ENST00000635754 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 LGALSLQ3ZCW2 172 aaPredicted RBP11.26□□□□□ -0.61
CLN6-211ENST00000635754 Q9H3A6 140 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 HUWE1Q7Z6Z7 4374 aaKnown RBP11.26□□□□□ -0.61
CLN6-211ENST00000635754 ZFP69Q49AA0 526 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 BAP18Q8IXM2 172 aa11.26□□□□□ -0.61
CLN6-211ENST00000635754 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
CLN6-211ENST00000635754 NPIPB6E9PJ23 425 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 GCHFRP30047 84 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 CSN1S1P47710 185 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 CD300CQ08708 224 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 IQCF2Q8IXL9 164 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 STOML3Q8TAV4 291 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 IGF2BP2-AS1Q96M15 143 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
CLN6-211ENST00000635754 UMAD1C9J7I0 102 aa11.24□□□□□ -0.61
CLN6-211ENST00000635754 INSP01308 110 aa11.24□□□□□ -0.61
CLN6-211ENST00000635754 MIFP14174 115 aa11.24□□□□□ -0.61
CLN6-211ENST00000635754 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
CLN6-211ENST00000635754 GOLT1BQ9Y3E0 138 aa11.24□□□□□ -0.61
CLN6-211ENST00000635754 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 TSPOP30536 169 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 CDKN1BP46527 198 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
CLN6-211ENST00000635754 MUC7Q8TAX7 377 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 CMTM2Q8TAZ6 248 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
CLN6-211ENST00000635754 X6R8D5 127 aa11.23□□□□□ -0.61
CLN6-211ENST00000635754 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
CLN6-211ENST00000635754 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
CLN6-211ENST00000635754 LEPP41159 167 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 EIF5AL1Q6IS14 154 aaKnown RBP11.22□□□□□ -0.61
CLN6-211ENST00000635754 Q8NAQ8 132 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 SUN5Q8TC36 379 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 TMED6Q8WW62 240 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
CLN6-211ENST00000635754 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 PGPA6NDG6 321 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
CLN6-211ENST00000635754 CT45A10P0DMU9 189 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 ERCC8Q13216 396 aa11.21□□□□□ -0.61
CLN6-211ENST00000635754 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms