RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 SPXQ9BT56 116 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 PEMTQ9UBM1 199 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 FGF6P10767 208 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 IGFL4Q6B9Z1 124 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 THBDP07204 575 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 UTF1Q5T230 341 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 Q8N8P6 123 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 LINC00527Q9UJ94 153 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 PHF3Q92576 2039 aaKnown RBP9.44□□□□□ -0.9
COL11A1-211ENST00000635193 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 SPANXCQ9NY87 97 aa9.44□□□□□ -0.9
COL11A1-211ENST00000635193 SPTAN1Q13813 2472 aaKnown RBP9.43□□□□□ -0.9
COL11A1-211ENST00000635193 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 PRSS46E5RG02 174 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 SOCS3O14543 225 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 IL15RAQ13261 267 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 NBASA2RRP1 2371 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 CACNA1HO95180 2353 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 SAP30O75446 220 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 WISP1O95388 367 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 TMEM105Q8N8V8 129 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 TMEM14BQ9NUH8 114 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 WIPF3A6NGB9 483 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 MORN5Q5VZ52 161 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 C9orf139Q6ZV77 190 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 SHANK2-AS3Q9BTD1 123 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 PRO1854Q9UHT4 67 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 GPR179Q6PRD1 2367 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 MRAPQ8TCY5 172 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 VWA8A3KMH1 1905 aa9.43□□□□□ -0.9
COL11A1-211ENST00000635193 BUB1B-PAK6H3BSN5 160 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 ETV2O00321 342 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-211ENST00000635193 C5orf64Q2M2E5 130 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 ZNF672Q499Z4 452 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-211ENST00000635193 TTC28Q96AY4 2481 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.42□□□□□ -0.9
COL11A1-211ENST00000635193 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 STHQ8IWL8 128 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 SRRM4A7MD48 611 aaKnown RBP9.42□□□□□ -0.9
COL11A1-211ENST00000635193 PF4P02776 101 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 KLRD1Q13241 179 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 C2orf66Q6UXQ4 117 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 BOD1L2Q8IYS8 172 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 A0A1W2PPI3 338 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 ZNF524Q96C55 264 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 KIAA2026Q5HYC2 2103 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 TRPM7Q96QT4 1865 aa9.42□□□□□ -0.9
COL11A1-211ENST00000635193 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 LMO1P25800 156 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 NDPQ00604 133 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 PDE6HQ13956 83 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 MRPL51Q4U2R6 128 aaKnown RBP9.41□□□□□ -0.9
COL11A1-211ENST00000635193 VMO1Q7Z5L0 202 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 PRADC1Q9BSG0 188 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 DOCK9Q9BZ29 2069 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 FANCMQ8IYD8 2048 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 MDS2Q8NDY4 140 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
COL11A1-211ENST00000635193 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
COL11A1-211ENST00000635193 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.9
COL11A1-211ENST00000635193 AKAP6Q13023 2319 aa9.4□□□□□ -0.9
COL11A1-211ENST00000635193 ANXA2RQ3ZCQ2 193 aa9.4□□□□□ -0.9
COL11A1-211ENST00000635193 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.9
COL11A1-211ENST00000635193 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.9
COL11A1-211ENST00000635193 OOSP1A8MZH6 123 aa9.4□□□□□ -0.9
COL11A1-211ENST00000635193 ERCC8Q13216 396 aa9.4□□□□□ -0.9
COL11A1-211ENST00000635193 TRGV4A0A0C4DH28 118 aa9.4□□□□□ -0.91
COL11A1-211ENST00000635193 PYGO2Q9BRQ0 406 aa9.4□□□□□ -0.91
COL11A1-211ENST00000635193 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.91
COL11A1-211ENST00000635193 TMEM141Q96I45 108 aa9.4□□□□□ -0.91
COL11A1-211ENST00000635193 CARD19Q96LW7 228 aa9.4□□□□□ -0.91
COL11A1-211ENST00000635193 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 MINOS1Q5TGZ0 78 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 C8orf49Q96NF6 230 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 NDUFA4L2Q9NRX3 87 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 ZNRD1Q9P1U0 126 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 MINOS1-NBL1R4GNA1 71 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 TSC2P49815 1807 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 SH2D6Q7Z4S9 175 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 RLFQ13129 1914 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 TDRG1Q3Y452 100 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
COL11A1-211ENST00000635193 A0A087WWL8 130 aa9.38□□□□□ -0.91
COL11A1-211ENST00000635193 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
COL11A1-211ENST00000635193 LYPD2Q6UXB3 125 aa9.38□□□□□ -0.91
COL11A1-211ENST00000635193 TMEM219Q86XT9 240 aa9.38□□□□□ -0.91
COL11A1-211ENST00000635193 C1orf159Q96HA4 380 aa9.38□□□□□ -0.91
COL11A1-211ENST00000635193 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
COL11A1-211ENST00000635193 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
COL11A1-211ENST00000635193 A0A1W2PRX2 142 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms