RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 CIB1Q99828 191 aa3.48□□□□□ -1.85
LINC00649-220ENST00000628906 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
LINC00649-220ENST00000628906 GABARAPL3Q9BY60 117 aa3.48□□□□□ -1.85
LINC00649-220ENST00000628906 AMBNQ9NP70 447 aa3.48□□□□□ -1.85
LINC00649-220ENST00000628906 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
LINC00649-220ENST00000628906 RAB22AQ9UL26 194 aa3.48□□□□□ -1.85
LINC00649-220ENST00000628906 CARHSP1Q9Y2V2 147 aaKnown RBP3.48□□□□□ -1.85
LINC00649-220ENST00000628906 IGKV1D-37A0A075B6S9 117 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 LINC00854A0A1B0GVQ3 168 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 NDUFS6O75380 124 aaKnown RBP3.47□□□□□ -1.85
LINC00649-220ENST00000628906 IGKV1-39P01597 117 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 IGKV1D-39P04432 117 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 CD1AP06126 327 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 CFC1P0CG37 223 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 SMIM18P0DKX4 95 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 GADD45AP24522 165 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 LEPP41159 167 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 LYZP61626 148 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 GUK1Q16774 197 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 C2orf83Q53S99 150 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 ARRDC1Q8N5I2 433 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 ZNF485Q8NCK3 441 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 BPIFCQ8NFQ6 507 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 OR4C5Q8NGB2 326 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 PRSS3P2Q8NHM4 247 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 BORCS5Q969J3 196 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 ACY3Q96HD9 319 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 SLC25A22Q9H936 323 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 SLC45A2Q9UMX9 530 aa3.47□□□□□ -1.85
LINC00649-220ENST00000628906 A0A087WWC5 75 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 TRBV6-4A0A1B0GX49 114 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 C7orf71A4D174 169 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 G3V2T6 193 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 MPDU1O75352 247 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 HLA-DQA1P01909 254 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 RLN1P04808 185 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 GABRB1P18505 474 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 CBX5P45973 191 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 ZNF138P52744 262 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 POLR2GP62487 172 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC00649-220ENST00000628906 BTN1A1Q13410 526 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 KRTAP26-1Q6PEX3 210 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 MARCH1Q8TCQ1 289 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 FAM3DQ96BQ1 224 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 GFI1Q99684 422 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 PRADC1Q9BSG0 188 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 PPDPFQ9H3Y8 114 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 C8orf4Q9NR00 106 aa3.46□□□□□ -1.86
LINC00649-220ENST00000628906 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 TMEM272A0A1B0GTI8 110 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 hDV102S1A0JD36 115 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 AQP12BA6NM10 295 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 KLLNB2CW77 178 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 PRAC2D3DTV9 90 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 FXYD4P59646 89 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 TSPAN5P62079 268 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 RPS25P62851 125 aaKnown RBP3.45□□□□□ -1.86
LINC00649-220ENST00000628906 SRPXP78539 464 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 KLF9Q13886 244 aaPredicted RBP3.45□□□□□ -1.86
LINC00649-220ENST00000628906 ARL6IP1Q15041 203 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 RHOHQ15669 191 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 IZUMO4Q1ZYL8 232 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 AQP12AQ8IXF9 295 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 TMEM170AQ8WVE7 144 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 SPXQ9BT56 116 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 GABARAPL1Q9H0R8 117 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 PLGRKTQ9HBL7 147 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 EHFQ9NZC4 300 aa3.45□□□□□ -1.86
LINC00649-220ENST00000628906 A0A087X0K7 114 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 KRTAP23-1A1A580 65 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 PGPA6NDG6 321 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 CRYM-AS1A6NIL9 109 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 ZFP92A6NM28 416 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 FKBP6O75344 327 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 IGLV7-43P04211 117 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 CDNFQ49AH0 187 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 TMEM17Q86X19 198 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 OR4D10Q8NGI6 311 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 RHOXF1Q8NHV9 184 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 SUN5Q8TC36 379 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 RAB24Q969Q5 203 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 SAMD10Q9BYL1 202 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 RPP21Q9H633 154 aaKnown RBP3.44□□□□□ -1.86
LINC00649-220ENST00000628906 ENY2Q9NPA8 101 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 LINC00474Q9P2X8 69 aa3.44□□□□□ -1.86
LINC00649-220ENST00000628906 IGLV10-54A0A075B6I4 117 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 A0A087WX48 190 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 A0A096LNI7 61 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 CFDP00746 253 aaPredicted RBP3.43□□□□□ -1.86
LINC00649-220ENST00000628906 MT-ND6P03923 174 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 FABP1P07148 127 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 RANBP1P43487 201 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 OPCMLQ14982 345 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 MIAQ16674 131 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
LINC00649-220ENST00000628906 FAM219AQ8IW50 185 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms