RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SAV1Q9H4B6 383 aaPredicted RBP10.85□□□□□ -0.67
PNKP-221ENST00000627317 HLA-DRB4X5D2U9 266 aa10.85□□□□□ -0.67
PNKP-221ENST00000627317 F6UB75 175 aa10.84□□□□□ -0.67
PNKP-221ENST00000627317 FHITP49789 147 aa10.84□□□□□ -0.67
PNKP-221ENST00000627317 DPPA3Q6W0C5 159 aa10.84□□□□□ -0.67
PNKP-221ENST00000627317 TRPT1Q86TN4 253 aaKnown RBP10.84□□□□□ -0.67
PNKP-221ENST00000627317 RPUSD4Q96CM3 377 aaKnown RBP10.84□□□□□ -0.67
PNKP-221ENST00000627317 TMEM167BQ9NRX6 74 aa10.84□□□□□ -0.67
PNKP-221ENST00000627317 PRELID1Q9Y255 219 aa10.84□□□□□ -0.67
PNKP-221ENST00000627317 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
PNKP-221ENST00000627317 A0A0J9YX75 114 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 H3BMM0 161 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 RAB5CP51148 216 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 RANP62826 216 aaKnown RBP10.83□□□□□ -0.68
PNKP-221ENST00000627317 ICAM4Q14773 271 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 HAGHQ16775 308 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 GDF5OSQ5U4N7 250 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 EXOC3-AS1Q8N2X6 119 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 OR4B1Q8NGF8 309 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 MRPL53Q96EL3 112 aaKnown RBP10.83□□□□□ -0.68
PNKP-221ENST00000627317 PLA2G2EQ9NZK7 142 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 AGRNO00468 2067 aa10.83□□□□□ -0.68
PNKP-221ENST00000627317 KIR2DL5BA0A0G2JN68 375 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 KIR2DL5BA0A0G2JPC4 375 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 ZNF705FA8MVS1 300 aaPredicted RBP10.82□□□□□ -0.68
PNKP-221ENST00000627317 M0R3E3 92 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 DUSP14O95147 198 aaKnown RBP10.82□□□□□ -0.68
PNKP-221ENST00000627317 FGF8P55075 233 aaPredicted RBP10.82□□□□□ -0.68
PNKP-221ENST00000627317 HIST1H1AQ02539 215 aaPredicted RBP10.82□□□□□ -0.68
PNKP-221ENST00000627317 KIR2DL5AQ8N109 375 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 LYPD1Q8N2G4 141 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 OR8A1Q8NGG7 326 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 KIR2DL5BQ8NHK3 375 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 Q9H3A6 140 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 CSMD3Q7Z407 3707 aa10.82□□□□□ -0.68
PNKP-221ENST00000627317 RYR3Q15413 4870 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 CA1P00915 261 aaPredicted RBP10.81□□□□□ -0.68
PNKP-221ENST00000627317 PRB4P10163 310 aaPredicted RBP10.81□□□□□ -0.68
PNKP-221ENST00000627317 SULT1A2P50226 295 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 MORN3Q6PF18 240 aaPredicted RBP10.81□□□□□ -0.68
PNKP-221ENST00000627317 OR10J6PQ8NGY7 276 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 SFT2D1Q8WV19 159 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 CSTL1Q9H114 145 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 OTORQ9NRC9 128 aa10.81□□□□□ -0.68
PNKP-221ENST00000627317 UBE2CO00762 179 aa10.8□□□□□ -0.68
PNKP-221ENST00000627317 H2AFB1P0C5Y9 115 aa10.8□□□□□ -0.68
PNKP-221ENST00000627317 ZNF705DP0CH99 300 aaPredicted RBP10.8□□□□□ -0.68
PNKP-221ENST00000627317 ZNF705BP0CI00 300 aaPredicted RBP10.8□□□□□ -0.68
PNKP-221ENST00000627317 CSN1S1P47710 185 aa10.8□□□□□ -0.68
PNKP-221ENST00000627317 CNN1P51911 297 aaKnown RBP10.8□□□□□ -0.68
PNKP-221ENST00000627317 NUTF2P61970 127 aaKnown RBP10.8□□□□□ -0.68
PNKP-221ENST00000627317 ALKAL2Q6UX46 152 aa10.8□□□□□ -0.68
PNKP-221ENST00000627317 ZMAT4Q9H898 229 aa10.8□□□□□ -0.68
PNKP-221ENST00000627317 A0A1B0GV50 99 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 PRAC2D3DTV9 90 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 CMTM2Q8TAZ6 248 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 SUN5Q8TC36 379 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 MBD3L1Q8WWY6 194 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 CLUHP3Q96NS8 147 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 SPATA25Q9BR10 227 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 TMPRSS5Q9H3S3 457 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 EDA2RQ9HAV5 297 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
PNKP-221ENST00000627317 PGPA6NDG6 321 aa10.78□□□□□ -0.68
PNKP-221ENST00000627317 TEX46H3BTG2 121 aa10.78□□□□□ -0.68
PNKP-221ENST00000627317 DEFB135Q30KP9 77 aa10.78□□□□□ -0.68
PNKP-221ENST00000627317 RPH3ALQ9UNE2 315 aa10.78□□□□□ -0.68
PNKP-221ENST00000627317 IGKV2-40A0A087WW87 121 aaPredicted RBP10.77□□□□□ -0.69
PNKP-221ENST00000627317 A0A1W2PRE2 83 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 A8MTW9 85 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 ZNF705EA8MWA4 302 aaPredicted RBP10.77□□□□□ -0.69
PNKP-221ENST00000627317 IGKV2D-40P01614 121 aaPredicted RBP10.77□□□□□ -0.69
PNKP-221ENST00000627317 HBE1P02100 147 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.69
PNKP-221ENST00000627317 FXYD7P58549 80 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 UBE2G2P60604 165 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 Q6ZWC4 215 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 RXFP4Q8TDU9 374 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 C1QTNF4Q9BXJ3 329 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 RETNQ9HD89 108 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 STARD9Q9P2P6 4700 aa10.77□□□□□ -0.69
PNKP-221ENST00000627317 GGTLC3B5MD39 225 aa10.76□□□□□ -0.69
PNKP-221ENST00000627317 NPIPB6E9PJ23 425 aa10.76□□□□□ -0.69
PNKP-221ENST00000627317 C5orf17Q8NAS9 161 aa10.76□□□□□ -0.69
PNKP-221ENST00000627317 MUC7Q8TAX7 377 aa10.76□□□□□ -0.69
PNKP-221ENST00000627317 SLC35B3Q9H1N7 401 aa10.76□□□□□ -0.69
PNKP-221ENST00000627317 XCL2Q9UBD3 114 aa10.76□□□□□ -0.69
PNKP-221ENST00000627317 YTHDF2Q9Y5A9 579 aaKnown RBP10.76□□□□□ -0.69
PNKP-221ENST00000627317 C3orf84H3BNL1 204 aa10.75□□□□□ -0.69
PNKP-221ENST00000627317 AMBPP02760 352 aa10.75□□□□□ -0.69
PNKP-221ENST00000627317 PPT1P50897 306 aa10.75□□□□□ -0.69
PNKP-221ENST00000627317 SUMO1P63165 101 aaKnown RBP10.75□□□□□ -0.69
PNKP-221ENST00000627317 TMEM78Q5T7P6 136 aa10.75□□□□□ -0.69
PNKP-221ENST00000627317 AMTNQ6UX39 209 aa10.75□□□□□ -0.69
PNKP-221ENST00000627317 ARL2-SNX15V9GYD0 113 aa10.75□□□□□ -0.69
PNKP-221ENST00000627317 DYNC2H1Q8NCM8 4307 aaKnown RBP10.75□□□□□ -0.69
PNKP-221ENST00000627317 TRAV1-1A0A0B4J248 108 aa10.74□□□□□ -0.69
PNKP-221ENST00000627317 FAM74A7A6NL05 159 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms