RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 C10orf113Q5VZT2 155 aa9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 BPIFA4PQ86YQ2 179 aa9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 ZNF431Q8TF32 576 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 TMEM263Q8WUH6 116 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 NUDT15Q9NV35 164 aa9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 TIMM8BQ9Y5J9 83 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-241ENST00000626948 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 H7BYZ3 331 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 COX7A2P2O60397 106 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 NDUFB4O95168 129 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 CAMLGP49069 296 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
SOX2-OT-241ENST00000626948 FAM25EA8MYX2 175 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 J3KRW8 73 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 M0R3E3 92 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 CAV2P51636 162 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 RAB32Q13637 225 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 ZNF493Q6ZR52 646 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 C2orf50Q96LR7 162 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
SOX2-OT-241ENST00000626948 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 L7N2F9 121 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 BCAP31P51572 246 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 VAMP2P63027 116 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 ERCC8Q13216 396 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 CNPY1Q3B7I2 92 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 Q6ZQT7 251 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 C12orf45Q8N5I9 185 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 ATG101Q9BSB4 218 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 LYRM2Q9NU23 88 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 SLC39A9Q9NUM3 307 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 UQCC1Q9NVA1 299 aa9.38□□□□□ -0.91
SOX2-OT-241ENST00000626948 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 TRAV26-1A0A087WT03 109 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 UBE2L5PA0A1B0GUS4 154 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 C5orf51A6NDU8 294 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 GAGE7O76087 117 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 SSX7Q7RTT5 188 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 CHAC2Q8WUX2 184 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 PXMP4Q9Y6I8 212 aa9.37□□□□□ -0.91
SOX2-OT-241ENST00000626948 A0A0J9YY99 117 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 PYYP10082 97 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 SULT1A1P50225 295 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 CD300CQ08708 224 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 ZNF846Q147U1 533 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 ESRGQ1W209 222 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 PRR9Q5T870 116 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 Q6ZTI0 123 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 C11orf72Q8NBR9 251 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
SOX2-OT-241ENST00000626948 KLLNB2CW77 178 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 ZNF253O75346 499 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 S100A10P60903 97 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 NHLH2Q02577 135 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 OR5I1Q13606 314 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 SOHLH1Q5JUK2 328 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 Q6ZRG5 221 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 EXOC3-AS1Q8N2X6 119 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 RXFP4Q8TDU9 374 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 TMPRSS5Q9H3S3 457 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
SOX2-OT-241ENST00000626948 H0YIZ8 118 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 SIX6O95475 246 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 S100A11P31949 105 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 CCL18P55774 89 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 BAXQ07812 192 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 BTN1A1Q13410 526 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 GUK1Q16774 197 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 OR1L4Q8NGR5 311 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 GNPNAT1Q96EK6 184 aaPredicted RBP9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 Q9H8V8 135 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 GSN-AS1Q9NRJ2 163 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
SOX2-OT-241ENST00000626948 M6PRP20645 277 aa9.33□□□□□ -0.92
SOX2-OT-241ENST00000626948 FGF7P21781 194 aa9.33□□□□□ -0.92
SOX2-OT-241ENST00000626948 IFITM3Q01628 133 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms