RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CSMD2Q7Z408 3487 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 IGHV3-7P01780 117 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 DEFA4P12838 97 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 IL3RAP26951 378 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 SLC35E1Q96K37 410 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 ZNF714Q96N38 554 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 GPR82Q96P67 336 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 LINC00574Q9H8X3 128 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 PLEKHA3Q9HB20 300 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 TMEM167BQ9NRX6 74 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 CA2P00918 260 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 GZMBP10144 247 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 MYOD1P15172 320 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 TCF23Q7RTU1 214 aa9.13□□□□□ -0.95
LINC00538-201ENST00000626109 CCDC168Q8NDH2 2452 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 CYSRT1A8MQ03 144 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 C9JCJ5 164 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 CCL3L1P16619 93 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 UBE2E1P51965 193 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 TAS2R45P59539 299 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 PRCDQ00LT1 54 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 HIST1H1AQ02539 215 aaPredicted RBP9.12□□□□□ -0.95
LINC00538-201ENST00000626109 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 UBE2E2Q96LR5 201 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 INSIG2Q9Y5U4 225 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 NOTCH2Q04721 2471 aa9.12□□□□□ -0.95
LINC00538-201ENST00000626109 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 M0R1W7 72 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 UPK2O00526 184 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 FCN1O00602 326 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 ZNF90Q03938 601 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 Q6ZVH6 145 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 GBGT1Q8N5D6 347 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 LEAP2Q969E1 77 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 EEF1AKMT3Q96AZ1 226 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 DERL1Q9BUN8 251 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 RNASE7Q9H1E1 156 aaKnown RBP9.11□□□□□ -0.95
LINC00538-201ENST00000626109 MALRD1Q5VYJ5 2156 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 ZNF705GA8MUZ8 300 aaPredicted RBP9.11□□□□□ -0.95
LINC00538-201ENST00000626109 RBP4P02753 201 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 YPEL3P61236 119 aaPredicted RBP9.11□□□□□ -0.95
LINC00538-201ENST00000626109 PNKDQ8N490 385 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 NDFIP1Q9BT67 221 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 BET1LQ9NYM9 111 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 IL36BQ9NZH7 164 aa9.11□□□□□ -0.95
LINC00538-201ENST00000626109 CR1P17927 2039 aa9.1□□□□□ -0.95
LINC00538-201ENST00000626109 MMP23AO75900 390 aa9.1□□□□□ -0.95
LINC00538-201ENST00000626109 APOA2P02652 100 aa9.1□□□□□ -0.95
LINC00538-201ENST00000626109 AMTP48728 403 aa9.1□□□□□ -0.95
LINC00538-201ENST00000626109 C2orf83Q53S99 150 aa9.1□□□□□ -0.95
LINC00538-201ENST00000626109 C1orf229Q6ZS94 237 aaPredicted RBP9.1□□□□□ -0.95
LINC00538-201ENST00000626109 OSR1Q8TAX0 266 aaPredicted RBP9.1□□□□□ -0.95
LINC00538-201ENST00000626109 HSPB9Q9BQS6 159 aa9.1□□□□□ -0.95
LINC00538-201ENST00000626109 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
LINC00538-201ENST00000626109 A0A0G2JLM5 398 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 K7EMT4 169 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 RPL7P18124 248 aaKnown RBP9.09□□□□□ -0.95
LINC00538-201ENST00000626109 DLX1P56177 255 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 ERHP84090 104 aaKnown RBP9.09□□□□□ -0.95
LINC00538-201ENST00000626109 PAX8Q06710 450 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 SPATA31B1PQ5VZV4 182 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 ZNRF2Q8NHG8 242 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 LAMTOR2Q9Y2Q5 125 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 TOMM40O96008 361 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 LINC00869P0C866 280 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 CT45A6P0DMU7 189 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 CT45A5P0DMU8 189 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 CT45A7P0DMV0 189 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 IGHV1-8P0DP01 117 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 EMP1P54849 157 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 NABP2Q9BQ15 211 aa9.09□□□□□ -0.95
LINC00538-201ENST00000626109 TRBV20OR9-2A0A075B6H5 130 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 TEX50A0A1B0GTY4 177 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 CD5LO43866 347 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 GNG4P50150 75 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 ERVFC1-1P60608 527 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 TIGITQ495A1 244 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 ZFAND6Q6FIF0 208 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 VMO1Q7Z5L0 202 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 OR2K2Q8NGT1 345 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 OR4A5Q8NH83 315 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 VSTM2AQ8TAG5 236 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 MRPL32Q9BYC8 188 aaKnown RBP9.08□□□□□ -0.96
LINC00538-201ENST00000626109 COMMD5Q9GZQ3 224 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 DOCK11Q5JSL3 2073 aa9.08□□□□□ -0.96
LINC00538-201ENST00000626109 PRTN3P24158 256 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 SUB1P53999 127 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00538-201ENST00000626109 TPPP2P59282 170 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 MIR17HGQ75NE6 70 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 ZNF664Q8N3J9 261 aa9.07□□□□□ -0.96
LINC00538-201ENST00000626109 OR1N2Q8NGR9 330 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms