RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 OR11H6Q8NGC7 330 aa13.87□□□□□ -0.19
PCF11-207ENST00000624931 NBPF19A0A087WUL8 3843 aa13.86□□□□□ -0.19
PCF11-207ENST00000624931 NUDT3O95989 172 aa13.86□□□□□ -0.19
PCF11-207ENST00000624931 SLC25A16P16260 332 aa13.86□□□□□ -0.19
PCF11-207ENST00000624931 MPV17L2Q567V2 206 aa13.86□□□□□ -0.19
PCF11-207ENST00000624931 RNASE8Q8TDE3 154 aaKnown RBP13.86□□□□□ -0.19
PCF11-207ENST00000624931 INSIG2Q9Y5U4 225 aa13.86□□□□□ -0.19
PCF11-207ENST00000624931 TNCP24821 2201 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 LY6LH3BQJ8 138 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 TAX1BP3O14907 124 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 IGHV3-48P01763 117 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 ANKRD39Q53RE8 183 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 ASPHD1Q5U4P2 390 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 KRTAP1-3Q8IUG1 177 aa13.85□□□□□ -0.19
PCF11-207ENST00000624931 C1orf122Q6ZSJ8 110 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 ARL6IP6Q8N6S5 226 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 RPEQ96AT9 228 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 RITA1Q96K30 269 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 SLC25A39Q9BZJ4 359 aaPredicted RBP13.84□□□□□ -0.19
PCF11-207ENST00000624931 AP5S1Q9NUS5 200 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 SIGLEC9Q9Y336 463 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 HILPDAQ9Y5L2 63 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 VPS13CQ709C8 3753 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 IGHV1-3A0A0C4DH29 117 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 hDV102S1A0JD36 115 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 RNF223E7ERA6 249 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 OR10AG1Q8NH19 301 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 SGK494Q96LW2 274 aa13.84□□□□□ -0.19
PCF11-207ENST00000624931 IGHV3OR16-10A0A075B7F0 116 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 SERTM2A0A1B0GWG4 89 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 SH2D7A6NKC9 451 aaPredicted RBP13.83□□□□□ -0.2
PCF11-207ENST00000624931 IGLV2-11P01706 119 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 PPBPP02775 128 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 IGLC1P0CG04 106 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 COX8AP10176 69 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 SEC11AP67812 179 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 FA2HQ7L5A8 372 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 PRNTQ86SH4 94 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 BPIFA4PQ86YQ2 179 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 LRRC75A-AS1Q8N1F1 130 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 DYNAPQ8N1N2 210 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 OR1N2Q8NGR9 330 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 TMUB1Q9BVT8 246 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 TPSG1Q9NRR2 321 aa13.83□□□□□ -0.2
PCF11-207ENST00000624931 MSMBP08118 114 aa13.82□□□□□ -0.2
PCF11-207ENST00000624931 PSG1P11464 419 aa13.82□□□□□ -0.2
PCF11-207ENST00000624931 LYZP61626 148 aa13.82□□□□□ -0.2
PCF11-207ENST00000624931 PAX8Q06710 450 aa13.82□□□□□ -0.2
PCF11-207ENST00000624931 RASL11BQ9BPW5 248 aa13.82□□□□□ -0.2
PCF11-207ENST00000624931 FASNP49327 2511 aaKnown RBP13.82□□□□□ -0.2
PCF11-207ENST00000624931 GPR183P32249 361 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 PSMG4Q5JS54 123 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 ZNF493Q6ZR52 646 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 LINC00173Q6ZV60 143 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 GOLT1AQ6ZVE7 132 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 CIARTQ8N365 385 aaPredicted RBP13.81□□□□□ -0.2
PCF11-207ENST00000624931 Q96MF0 132 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 ZNF747Q9BV97 191 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 DPM3Q9P2X0 92 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 PEF1Q9UBV8 284 aaKnown RBP13.81□□□□□ -0.2
PCF11-207ENST00000624931 MAP1AP78559 2803 aaPredicted RBP13.81□□□□□ -0.2
PCF11-207ENST00000624931 CR1P17927 2039 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 FBLL1A6NHQ2 334 aaKnown RBP13.81□□□□□ -0.2
PCF11-207ENST00000624931 M0QZ24 198 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 PPP1R27Q86WC6 154 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 SHANK2-AS3Q9BTD1 123 aa13.81□□□□□ -0.2
PCF11-207ENST00000624931 TRBV19A0A075B6N1 114 aa13.8□□□□□ -0.2
PCF11-207ENST00000624931 TIMM23O14925 209 aa13.8□□□□□ -0.2
PCF11-207ENST00000624931 CNTFRP26992 372 aa13.8□□□□□ -0.2
PCF11-207ENST00000624931 COTL1Q14019 142 aa13.8□□□□□ -0.2
PCF11-207ENST00000624931 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
PCF11-207ENST00000624931 PRSS3P2Q8NHM4 247 aa13.8□□□□□ -0.2
PCF11-207ENST00000624931 SRSF12Q8WXF0 261 aaKnown RBP13.8□□□□□ -0.2
PCF11-207ENST00000624931 HECTD1Q9ULT8 2610 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 TEX22C9J3V5 150 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 I3L2K1 104 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 CD24P25063 80 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 PSG3Q16557 428 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 Q6ZVH6 145 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 HIF1ANQ9NWT6 349 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 PSG8Q9UQ74 426 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
PCF11-207ENST00000624931 H3BRN7 92 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 PDE6HQ13956 83 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 CFHR4Q92496 578 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 AJUBAQ96IF1 538 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 TRAV40A0A0B4J280 105 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 MUC21A0A0G2JKD1 596 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 CENPVL3A0A0U1RRI6 287 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 MUC21A0A140T8X8 626 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 B4DSR2 109 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 CT45A10P0DMU9 189 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 SAA4P35542 130 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 UBE2E1P51965 193 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 PLGLAQ15195 96 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 MUC21Q5SSG8 566 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 U3KQK5 164 aa13.78□□□□□ -0.2
PCF11-207ENST00000624931 SIVA1O15304 175 aa13.77□□□□□ -0.21
PCF11-207ENST00000624931 CEACAM3P40198 252 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms