RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 NAP1L6A6NFF2 107 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 H3BNG1 76 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 BTF3P20290 206 aaKnown RBP16.44■□□□□ 0.22
CPSF1-214ENST00000622776 KRTAP10-2P60368 255 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 C4orf46Q504U0 113 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 MORN5Q5VZ52 161 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 GGACTQ9BVM4 153 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 SRRQ9GZT4 340 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 RCL1Q9Y2P8 373 aaKnown RBP16.44■□□□□ 0.22
CPSF1-214ENST00000622776 MRPS16Q9Y3D3 137 aaKnown RBP16.44■□□□□ 0.22
CPSF1-214ENST00000622776 PXMP4Q9Y6I8 212 aa16.44■□□□□ 0.22
CPSF1-214ENST00000622776 J3KRW8 73 aa16.43■□□□□ 0.22
CPSF1-214ENST00000622776 IGLC2P0DOY2 106 aa16.43■□□□□ 0.22
CPSF1-214ENST00000622776 OPCMLQ14982 345 aa16.43■□□□□ 0.22
CPSF1-214ENST00000622776 SAT2Q96F10 170 aaPredicted RBP16.43■□□□□ 0.22
CPSF1-214ENST00000622776 MGST2Q99735 147 aa16.43■□□□□ 0.22
CPSF1-214ENST00000622776 GSKIPQ9P0R6 139 aa16.43■□□□□ 0.22
CPSF1-214ENST00000622776 H3BQ15 152 aa16.42■□□□□ 0.22
CPSF1-214ENST00000622776 CT45A10P0DMU9 189 aa16.42■□□□□ 0.22
CPSF1-214ENST00000622776 INPP1P49441 399 aa16.42■□□□□ 0.22
CPSF1-214ENST00000622776 C10orf113Q5VZT2 155 aa16.42■□□□□ 0.22
CPSF1-214ENST00000622776 TRAV12-3A0A0B4J271 114 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 LINC00854A0A1B0GVQ3 168 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 C7orf66A4D0T2 115 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 LEPP41159 167 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 DAZ2Q13117 558 aaKnown RBP16.41■□□□□ 0.22
CPSF1-214ENST00000622776 SPANXN2Q5MJ10 180 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 ODF3Q96PU9 254 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 TMPRSS5Q9H3S3 457 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 ZNF586Q9NXT0 402 aa16.41■□□□□ 0.22
CPSF1-214ENST00000622776 BAK1Q16611 211 aa16.4■□□□□ 0.22
CPSF1-214ENST00000622776 TRIQKQ629K1 86 aa16.4■□□□□ 0.22
CPSF1-214ENST00000622776 Q6ZTI0 123 aa16.4■□□□□ 0.22
CPSF1-214ENST00000622776 ZNF431Q8TF32 576 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-214ENST00000622776 PYGO2Q9BRQ0 406 aa16.4■□□□□ 0.22
CPSF1-214ENST00000622776 DNAJC4Q9NNZ3 241 aa16.4■□□□□ 0.22
CPSF1-214ENST00000622776 NPIPB6E9PJ23 425 aa16.39■□□□□ 0.21
CPSF1-214ENST00000622776 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-214ENST00000622776 TRAV5A0A0B4J249 113 aa16.38■□□□□ 0.21
CPSF1-214ENST00000622776 CCDC160A6NGH7 325 aa16.38■□□□□ 0.21
CPSF1-214ENST00000622776 CAMLGP49069 296 aa16.38■□□□□ 0.21
CPSF1-214ENST00000622776 GUK1Q16774 197 aa16.38■□□□□ 0.21
CPSF1-214ENST00000622776 VSIG2Q96IQ7 327 aa16.38■□□□□ 0.21
CPSF1-214ENST00000622776 Q6ZRG5 221 aa16.37■□□□□ 0.21
CPSF1-214ENST00000622776 MITD1Q8WV92 249 aa16.37■□□□□ 0.21
CPSF1-214ENST00000622776 A0A096LPF7 62 aa16.36■□□□□ 0.21
CPSF1-214ENST00000622776 BTCP35070 178 aa16.36■□□□□ 0.21
CPSF1-214ENST00000622776 RAB31Q13636 194 aa16.36■□□□□ 0.21
CPSF1-214ENST00000622776 MIC13Q5XKP0 118 aa16.36■□□□□ 0.21
CPSF1-214ENST00000622776 GSN-AS1Q9NRJ2 163 aa16.36■□□□□ 0.21
CPSF1-214ENST00000622776 TRGV2A0A075B6R0 118 aa16.35■□□□□ 0.21
CPSF1-214ENST00000622776 L7N2F9 121 aa16.35■□□□□ 0.21
CPSF1-214ENST00000622776 LINC00315P59091 139 aa16.35■□□□□ 0.21
CPSF1-214ENST00000622776 VAMP2P63027 116 aa16.35■□□□□ 0.21
CPSF1-214ENST00000622776 NRARPQ7Z6K4 114 aa16.35■□□□□ 0.21
CPSF1-214ENST00000622776 C18orf15Q96N68 181 aa16.35■□□□□ 0.21
CPSF1-214ENST00000622776 SLC25A5P05141 298 aaKnown RBP16.34■□□□□ 0.21
CPSF1-214ENST00000622776 C11orf72Q8NBR9 251 aa16.34■□□□□ 0.21
CPSF1-214ENST00000622776 OR1L4Q8NGR5 311 aa16.34■□□□□ 0.21
CPSF1-214ENST00000622776 C7orf71A4D174 169 aa16.33■□□□□ 0.2
CPSF1-214ENST00000622776 CENPXA8MT69 81 aa16.33■□□□□ 0.2
CPSF1-214ENST00000622776 ZNF253O75346 499 aa16.33■□□□□ 0.2
CPSF1-214ENST00000622776 BCAP31P51572 246 aa16.33■□□□□ 0.2
CPSF1-214ENST00000622776 Q6ZRN7 208 aaPredicted RBP16.33■□□□□ 0.2
CPSF1-214ENST00000622776 ZNF680Q8NEM1 530 aa16.33■□□□□ 0.2
CPSF1-214ENST00000622776 M0R3E3 92 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 CCSO14618 274 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 CST7O76096 145 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 ERCC8Q13216 396 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 MRPL53Q96EL3 112 aaKnown RBP16.32■□□□□ 0.2
CPSF1-214ENST00000622776 PFDN5Q99471 154 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 SDHCQ99643 169 aaPredicted RBP16.32■□□□□ 0.2
CPSF1-214ENST00000622776 UQCC1Q9NVA1 299 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 FUT9Q9Y231 359 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 WDR83OSQ9Y284 106 aa16.32■□□□□ 0.2
CPSF1-214ENST00000622776 LSM5Q9Y4Y9 91 aaKnown RBP16.32■□□□□ 0.2
CPSF1-214ENST00000622776 DMBT1Q9UGM3 2413 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-214ENST00000622776 TRGV1A0A0A0MS02 117 aa16.31■□□□□ 0.2
CPSF1-214ENST00000622776 SIVA1O15304 175 aa16.31■□□□□ 0.2
CPSF1-214ENST00000622776 ZNF324O75467 553 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-214ENST00000622776 CAV2P51636 162 aa16.31■□□□□ 0.2
CPSF1-214ENST00000622776 ZNF846Q147U1 533 aa16.31■□□□□ 0.2
CPSF1-214ENST00000622776 LINC00467Q9BRT7 94 aa16.31■□□□□ 0.2
CPSF1-214ENST00000622776 TRBV19A0A075B6N1 114 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 KLLNB2CW77 178 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 CD300CQ08708 224 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 CNPY1Q3B7I2 92 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 ANXA2RQ3ZCQ2 193 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 C12orf45Q8N5I9 185 aaPredicted RBP16.3■□□□□ 0.2
CPSF1-214ENST00000622776 EIF4E3Q8N5X7 224 aaKnown RBP16.3■□□□□ 0.2
CPSF1-214ENST00000622776 LINC00477Q96M19 166 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 RBM38Q9H0Z9 239 aaKnown RBP16.3■□□□□ 0.2
CPSF1-214ENST00000622776 SLC39A9Q9NUM3 307 aa16.3■□□□□ 0.2
CPSF1-214ENST00000622776 FAM24AA6NFZ4 105 aa16.29■□□□□ 0.2
CPSF1-214ENST00000622776 RPL29P47914 159 aaKnown RBP16.29■□□□□ 0.2
CPSF1-214ENST00000622776 BTN1A1Q13410 526 aa16.29■□□□□ 0.2
CPSF1-214ENST00000622776 FAM19A4Q96LR4 140 aa16.29■□□□□ 0.2
CPSF1-214ENST00000622776 C11orf1Q9H5F2 150 aa16.29■□□□□ 0.2
CPSF1-214ENST00000622776 KLF12Q9Y4X4 402 aa16.29■□□□□ 0.2
CPSF1-214ENST00000622776 HERC1Q15751 4861 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms