RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 LINC00527Q9UJ94 153 aa9.46□□□□□ -0.9
CLTC-215ENST00000621829 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
CLTC-215ENST00000621829 PKIGQ9Y2B9 76 aa9.46□□□□□ -0.9
CLTC-215ENST00000621829 TNRC6BQ9UPQ9 1833 aaKnown RBP9.45□□□□□ -0.9
CLTC-215ENST00000621829 OBSL1O75147 1896 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 PEMTQ9UBM1 199 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 BSPH1Q075Z2 132 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 IFI6P09912 130 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 V9GYV3 84 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 IGKV1-27A0A075B6S5 117 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 ATP5J2P56134 94 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 RPL36AP83881 106 aaKnown RBP9.45□□□□□ -0.9
CLTC-215ENST00000621829 PCOLCEQ15113 449 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 RPL36ALQ969Q0 106 aaKnown RBP9.45□□□□□ -0.9
CLTC-215ENST00000621829 B9A039 149 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 ZNF581Q9P0T4 197 aa9.45□□□□□ -0.9
CLTC-215ENST00000621829 NPYP01303 97 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 DAD1P61803 113 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 ATP1A1-AS1Q5TC04 95 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 SCRT2Q9NQ03 307 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 CHCHD2Q9Y6H1 151 aaPredicted RBP9.44□□□□□ -0.9
CLTC-215ENST00000621829 SIVA1O15304 175 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 SP9P0CG40 484 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 COL24A1Q17RW2 1714 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 FAM104BQ5XKR9 115 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 Q8N8P6 123 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 NDUFS5O43920 106 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 M0R1W7 72 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 TIAF1O95411 115 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 FOXI2Q6ZQN5 318 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 SPTA1P02549 2419 aa9.44□□□□□ -0.9
CLTC-215ENST00000621829 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 EFNA4P52798 201 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 STPG1Q5TH74 334 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 NOTCH3Q9UM47 2321 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 SIPA1L1O43166 1804 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 PKDREJQ9NTG1 2253 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 SPTBN2O15020 2390 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 KLRD1Q13241 179 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 DTX2Q86UW9 622 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 FAM90A1Q86YD7 464 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
CLTC-215ENST00000621829 LINC00473A8K010 186 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 THADAQ6YHU6 1953 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.97e-7■□□□□ 9.4
CLTC-215ENST00000621829 TMEM141Q96I45 108 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 J3QW42 95 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 ATOX1O00244 68 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 NDUFS7O75251 213 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 SPTSSBQ8NFR3 76 aa9.43□□□□□ -0.9
CLTC-215ENST00000621829 SS18Q15532 418 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 RNF183Q96D59 192 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 LINC00477Q96M19 166 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 LTBRP36941 435 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 TAL2Q16559 108 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 Q6ZRM9 215 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 SPAARA0A1B0GVQ0 90 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 FOXF2Q12947 444 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 ZNF726P1Q15940 193 aa9.42□□□□□ -0.9
CLTC-215ENST00000621829 TMEM75Q8N9X5 138 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 U3KQE9 123 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 DKK1O94907 266 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 RNASE13Q5GAN3 156 aaKnown RBP9.41□□□□□ -0.9
CLTC-215ENST00000621829 YPEL3P61236 119 aaPredicted RBP9.41□□□□□ -0.9
CLTC-215ENST00000621829 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
CLTC-215ENST00000621829 WIPF2Q8TF74 440 aaPredicted RBP9.41□□□□□ -0.9
CLTC-215ENST00000621829 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 NXPH4O95158 308 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 SSC4DQ8WTU2 575 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 V9GYY9 64 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 A0A0G2JMZ2 1700 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 LRRC37AA6NMS7 1700 aa9.41□□□□□ -0.9
CLTC-215ENST00000621829 RNASE2P10153 161 aaKnown RBP9.41□□□□□ -0.9
CLTC-215ENST00000621829 IGLV3-21P80748 117 aaPredicted RBP9.41□□□□□ -0.9
CLTC-215ENST00000621829 LYPD3O95274 346 aa9.4□□□□□ -0.9
CLTC-215ENST00000621829 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
CLTC-215ENST00000621829 F8VRH5 84 aa9.4□□□□□ -0.9
CLTC-215ENST00000621829 MRPL55Q7Z7F7 128 aaKnown RBP9.4□□□□□ -0.9
CLTC-215ENST00000621829 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
CLTC-215ENST00000621829 IGLC1P0CG04 106 aa9.4□□□□□ -0.9
CLTC-215ENST00000621829 TRAV13-2A0A0B4J235 113 aa9.4□□□□□ -0.9
CLTC-215ENST00000621829 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.9
CLTC-215ENST00000621829 RLFQ13129 1914 aa9.4□□□□□ -0.91
CLTC-215ENST00000621829 SLC25A45Q8N413 288 aa9.4□□□□□ -0.91
CLTC-215ENST00000621829 IGLL5B9A064 214 aa9.39□□□□□ -0.91
CLTC-215ENST00000621829 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
CLTC-215ENST00000621829 F6UB75 175 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms