RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 BOLA2-SMG1P6H3BVE0 249 aa12.98□□□□□ -0.33
SCAMP4-213ENST00000621748 ISLRO14498 428 aa12.98□□□□□ -0.33
SCAMP4-213ENST00000621748 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
SCAMP4-213ENST00000621748 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
SCAMP4-213ENST00000621748 TMED6Q8WW62 240 aa12.98□□□□□ -0.33
SCAMP4-213ENST00000621748 F6UB75 175 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 TEX46H3BTG2 121 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 RAB5CP51148 216 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 GUK1Q16774 197 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 DPPA3Q6W0C5 159 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 IQCF2Q8IXL9 164 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 C16orf92Q96LL3 132 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 C20orf173Q96LM9 149 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 PAXXQ9BUH6 204 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 C1QTNF4Q9BXJ3 329 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 OR51M1Q9H341 326 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 RFNGQ9Y644 331 aa12.97□□□□□ -0.33
SCAMP4-213ENST00000621748 TRAV5A0A0B4J249 113 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 FXYD7P58549 80 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 PHYHIPLQ96FC7 376 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 HRH4Q9H3N8 390 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 RPRMQ9NS64 109 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 TMEM14CQ9P0S9 112 aa12.96□□□□□ -0.33
SCAMP4-213ENST00000621748 PQLC2Q6ZP29 291 aa12.95□□□□□ -0.34
SCAMP4-213ENST00000621748 OR4B1Q8NGF8 309 aa12.95□□□□□ -0.34
SCAMP4-213ENST00000621748 FAM213BQ8TBF2 198 aa12.95□□□□□ -0.34
SCAMP4-213ENST00000621748 RAB24Q969Q5 203 aa12.95□□□□□ -0.34
SCAMP4-213ENST00000621748 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
SCAMP4-213ENST00000621748 A0A0J9YX75 114 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 CXorf1O96002 111 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 HIST1H1EP10412 219 aaKnown RBP12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 HLA-DMBP28068 263 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 UBE2L3P68036 154 aaKnown RBP12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 SPATA31B1PQ5VZV4 182 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 ZNF705AQ6ZN79 300 aaPredicted RBP12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 RNF141Q8WVD5 230 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 SLC35B3Q9H1N7 401 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 BIRC6Q9NR09 4857 aa12.94□□□□□ -0.34
SCAMP4-213ENST00000621748 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 RPP25LQ8N5L8 163 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 C2CD4CQ8TF44 421 aa12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 BLNKQ8WV28 456 aa12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 CELA1Q9UNI1 258 aa12.93□□□□□ -0.34
SCAMP4-213ENST00000621748 A0A087X0K7 114 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 ZNF705FA8MVS1 300 aaPredicted RBP12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 NBEAP1P0C6P0 100 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 ZNF705DP0CH99 300 aaPredicted RBP12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 ZNF705BP0CI00 300 aaPredicted RBP12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 PSG9Q00887 426 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 MORN5Q5VZ52 161 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 Q6ZTC4 211 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 TMEM167BQ9NRX6 74 aa12.92□□□□□ -0.34
SCAMP4-213ENST00000621748 MAP1LC3B2A6NCE7 125 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 H2AFB1P0C5Y9 115 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 OR10J4P0C629 311 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 FAM74A1Q5RGS3 127 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 SFT2D1Q8WV19 159 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 NEU1Q99519 415 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 MAP1LC3BQ9GZQ8 125 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
SCAMP4-213ENST00000621748 IGHV3OR16-12A0A075B7B8 117 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 A8MTW9 85 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 IFNA7P01567 189 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 HBE1P02100 147 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 PYYP10082 97 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 SULT1A2P50226 295 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 LGALS9CQ6DKI2 356 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 ALKAL2Q6UX46 152 aa12.9□□□□□ -0.34
SCAMP4-213ENST00000621748 IGLL5B9A064 214 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 MRPS12O15235 138 aaKnown RBP12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 ARL14EPLP0DKL9 152 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 IGLC2P0DOY2 106 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 PDE6HQ13956 83 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 ZNF767PQ75MW2 155 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 APLNQ9ULZ1 77 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 FRAS1Q86XX4 4008 aa12.89□□□□□ -0.35
SCAMP4-213ENST00000621748 H3BTX0 84 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 ZNF253O75346 499 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 GCHFRP30047 84 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 CSN1S1P47710 185 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms