RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GAGE5Q13069 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE13Q4V321 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 C9orf66Q5T8R8 295 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 TMEM256Q8N2U0 113 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 A0A087WWL8 130 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 A8MWP6 167 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 INS-IGF2F8WCM5 200 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 K7EM74 188 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 NDUFA4O00483 81 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 SH2D1AO60880 128 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV4-59P01825 116 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 PAX9P55771 341 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 SPATA31B1PQ5VZV4 182 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 MGST2Q99735 147 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV2-5P01817 119 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 DERL1Q9BUN8 251 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 ZNRD1Q9P1U0 126 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 FER1L5A0AVI2 2057 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 FNDC1Q4ZHG4 1894 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 WT1P19544 449 aaPredicted RBP7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 AZU1P20160 251 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 RASL11AQ6T310 242 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 LYZL1Q6UWQ5 148 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 SHANK2-AS3Q9BTD1 123 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 KNCNA6PVL3 124 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 DKK1O94907 266 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 LHBP01229 141 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 IGLV1-44P01699 117 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 Q6ZR03 302 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 DEFB104AQ8WTQ1 72 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 PROK2Q9HC23 129 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 TEX36Q5VZQ5 186 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 ATP5L2Q7Z4Y8 100 aa7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 CHCHD1Q96BP2 118 aaKnown RBP7.87□□□□□ -1.15
CLTCL1-211ENST00000621271 TRBV25-1A0A075B6N4 114 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 CCL24O00175 119 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 LINC00205P59089 165 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 PDE6HQ13956 83 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 TMEM14EPQ6UXP3 125 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 NCR2O95944 276 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 YPEL3P61236 119 aaPredicted RBP7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 VWC2Q2TAL6 325 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 RNF144BQ7Z419 303 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 MPDZO75970 2070 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 CSTL1Q9H114 145 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 LIME1Q9H400 295 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 NCOR1P1Q9H4R4 102 aa7.86□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV4-30-2A0A087WSY4 118 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV4-61A0A0C4DH41 118 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 TECTAO75443 2155 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 GATD1Q8NB37 220 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 OR2K2Q8NGT1 345 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 RSPO3Q9BXY4 272 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 FNDC4Q9H6D8 234 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 SHISA9B4DS77 424 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 ETV2O00321 342 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 IGKCP01834 107 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 ZNF407Q9C0G0 2248 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 TMEM238C9JI98 176 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 Q6ZS49 121 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 ORAOV1Q8WV07 137 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 IFI27L1Q96BM0 104 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 MEGF9Q9H1U4 602 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 KLK9Q9UKQ9 250 aa7.85□□□□□ -1.15
CLTCL1-211ENST00000621271 SLAQ13239 276 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 LINC01559Q495D7 138 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 C5orf24Q7Z6I8 188 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 LY96Q9Y6Y9 160 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 FAM120AOSQ5T036 256 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 TRPT1Q86TN4 253 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 LINC00311Q8N616 119 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 D6R8Y8 96 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 NTF4P34130 210 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 CDKN1BP46527 198 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 ZNF833PQ6ZTB9 187 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV1OR15-1A0A075B7D0 117 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 ARMS2P0C7Q2 107 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 KAAG1Q9UBP8 84 aa7.84□□□□□ -1.15
CLTCL1-211ENST00000621271 A8MWV9 139 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 H3BUA1 57 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 UBE2V1Q13404 147 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 SMPXQ9UHP9 88 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 M0R2P5 195 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 IGHV4-39P01824 125 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 DUX4L9Q6RFH8 374 aaPredicted RBP7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 IGFL2Q6UWQ7 119 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 SLC25A2Q9BXI2 301 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 LAMTOR3Q9UHA4 124 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 ANAPC10Q9UM13 185 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 FNDC10F2Z333 226 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 C3orf79P0CE67 100 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 MLANAQ16655 118 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 LY6G5BQ8NDX9 201 aa7.83□□□□□ -1.16
CLTCL1-211ENST00000621271 NRGNQ92686 78 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms