RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SHISA9B4DS77 424 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 MLANAQ16655 118 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 C15orf32Q32M92 178 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 TRGV9Q99603 122 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 KLF2Q9Y5W3 355 aaPredicted RBP8.03□□□□□ -1.12
COL4A6-210ENST00000621266 IGLC7A0M8Q6 106 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 CEP250Q9BV73 2442 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 ANK1P16157 1881 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 SS18Q15532 418 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 SCRT2Q9NQ03 307 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 ANKRD36A6QL64 1941 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 THBDP07204 575 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 C2orf66Q6UXQ4 117 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
COL4A6-210ENST00000621266 IGLV3-32A0A0A0MS00 114 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 LYL1P12980 280 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 ARHGEF17Q96PE2 2063 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-210ENST00000621266 NDUFS5O43920 106 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 GAS1P54826 345 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 MESP1Q9BRJ9 268 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 A0A0G2JRQ6 117 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 A0A1W2PPI3 338 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 NXPH4O95158 308 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 FOXF2Q12947 444 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 LINC00477Q96M19 166 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 DOCK6Q96HP0 2047 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 SPTBN2O15020 2390 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 DOCK9Q9BZ29 2069 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 C17orf100A8MU93 164 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 Q8N8P6 123 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 C15orf62A8K5M9 175 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 IGHG2P01859 326 aa8.02□□□□□ -1.13
COL4A6-210ENST00000621266 IGKV1-27A0A075B6S5 117 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 E9PLN8 166 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 RPL35AP18077 110 aaKnown RBP8.01□□□□□ -1.13
COL4A6-210ENST00000621266 HLA-DMBP28068 263 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 MRPL35Q9NZE8 188 aaKnown RBP8.01□□□□□ -1.13
COL4A6-210ENST00000621266 LGALS9BQ3B8N2 356 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 MRPL51Q4U2R6 128 aaKnown RBP8.01□□□□□ -1.13
COL4A6-210ENST00000621266 LGALS9CQ6DKI2 356 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.01□□□□□ -1.13
COL4A6-210ENST00000621266 RNF144BQ7Z419 303 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 Q96MF0 132 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 MPDZO75970 2070 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 POU2AF1Q16633 256 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 TRAV26-1A0A087WT03 109 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 PRSS29PA6NIE9 313 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 ZNF581Q9P0T4 197 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 DKK2Q9UBU2 259 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 GREB1Q4ZG55 1949 aa8.01□□□□□ -1.13
COL4A6-210ENST00000621266 KNCNA6PVL3 124 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 EGR2P11161 476 aaPredicted RBP8□□□□□ -1.13
COL4A6-210ENST00000621266 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 FNDC1Q4ZHG4 1894 aaPredicted RBP8□□□□□ -1.13
COL4A6-210ENST00000621266 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 DKK1O94907 266 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 TRPT1Q86TN4 253 aaKnown RBP8□□□□□ -1.13
COL4A6-210ENST00000621266 C17orf82Q86X59 251 aaPredicted RBP8□□□□□ -1.13
COL4A6-210ENST00000621266 TRAV12-2A0A075B6T6 113 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 A0A1B0GX51 115 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 LINC00473A8K010 186 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 LYPD3O95274 346 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 FAM166AQ6J272 317 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 TMEM219Q86XT9 240 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 IGHV3-16A0A0C4DH30 117 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 A0A0G2JNJ9 132 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 DAD1P61803 113 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 SIGLEC8Q9NYZ4 499 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 Q9UFV3 132 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 NDUFA12Q9UI09 145 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 RALGAPA1Q6GYQ0 2036 aa8□□□□□ -1.13
COL4A6-210ENST00000621266 TP53BP1Q12888 1972 aaPredicted RBP7.99□□□□□ -1.13
COL4A6-210ENST00000621266 BAALCQ8WXS3 180 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 SRSF7Q16629 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
COL4A6-210ENST00000621266 PRSS46E5RG02 174 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 K7EMI3 77 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 BAALC-AS2P0C853 105 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 ZC2HC1AQ96GY0 325 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 ALPK2Q86TB3 2170 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 GBF1Q92538 1859 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 EFNA4P52798 201 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 KLRD1Q13241 179 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 V9GYV3 84 aa7.99□□□□□ -1.13
COL4A6-210ENST00000621266 NYNRINQ9P2P1 1898 aaKnown RBP7.98□□□□□ -1.13
COL4A6-210ENST00000621266 IGHV2-70DA0A0C4DH43 119 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 NPYP01303 97 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 TAL2Q16559 108 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 PNRC2Q9NPJ4 139 aaKnown RBP7.98□□□□□ -1.13
COL4A6-210ENST00000621266 SMIM27A0A1W2PRY6 76 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 M0R1W7 72 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 Q6ZRM9 215 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms