RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 A1L4Q6 167 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 C17orf100A8MU93 164 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 AREGP15514 252 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 CD69Q07108 199 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 FHL3Q13643 280 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 GDF5OSQ5U4N7 250 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 LINC00305Q7Z4B0 112 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 TEX29Q8N6K0 151 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 PAXXQ9BUH6 204 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 TPPP3Q9BW30 176 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 PTPRBP23467 1997 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 IGHV1-24A0A0C4DH33 117 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 TNFRSF13BO14836 293 aaPredicted RBP8.56□□□□□ -1.04
CDH1-214ENST00000621016 HLA-DQA1P01909 254 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
CDH1-214ENST00000621016 PRELID3AQ96N28 172 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 MAP1LC3CQ9BXW4 147 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 RAB9BQ9NP90 201 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 FCN3O75636 299 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 COX8AP10176 69 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
CDH1-214ENST00000621016 TRAV8-1A0A0A6YYK1 113 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 PGPA6NDG6 321 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 VCX2Q9H322 139 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 CELSR1Q9NYQ6 3014 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE12JA6NER3 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE7O76087 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 MT-ND6P03923 174 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE12FP0CL80 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE12GP0CL81 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE12IP0CL82 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE4Q13068 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 CR1LQ2VPA4 569 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 BCL6BQ8N143 479 aaPredicted RBP8.55□□□□□ -1.04
CDH1-214ENST00000621016 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 BSNQ9UPA5 3926 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.04
CDH1-214ENST00000621016 FAM90A9PA6NNJ1 464 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 CEACAM4O75871 244 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 OR5AL1P0C617 328 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 GAGE13Q4V321 117 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 PET117Q6UWS5 81 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 OR4C13Q8NGP0 309 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 SPXQ9BT56 116 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 LINC00312Q9Y6C7 94 aa8.55□□□□□ -1.04
CDH1-214ENST00000621016 RBP4P02753 201 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 Q6ZS92 163 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 CTSZQ9UBR2 303 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 CENPEQ02224 2701 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 DLL1O00548 723 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 LYZP61626 148 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
CDH1-214ENST00000621016 A0A1W2PPI3 338 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 TMEM189A5PLL7 270 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 NHLRC4P0CG21 123 aaPredicted RBP8.54□□□□□ -1.04
CDH1-214ENST00000621016 PATE2Q6UY27 113 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 FBXL15Q9H469 300 aa8.54□□□□□ -1.04
CDH1-214ENST00000621016 IGHV3-35A0A0C4DH35 117 aa8.53□□□□□ -1.04
CDH1-214ENST00000621016 KLF17Q5JT82 389 aaPredicted RBP8.53□□□□□ -1.04
CDH1-214ENST00000621016 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.53□□□□□ -1.04
CDH1-214ENST00000621016 FAM57AQ8TBR7 257 aa8.53□□□□□ -1.04
CDH1-214ENST00000621016 TXNDC17Q9BRA2 123 aa8.53□□□□□ -1.04
CDH1-214ENST00000621016 NDUFA4L2Q9NRX3 87 aa8.53□□□□□ -1.04
CDH1-214ENST00000621016 FABP5P3A8MUU1 101 aa8.53□□□□□ -1.04
CDH1-214ENST00000621016 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
CDH1-214ENST00000621016 Q71RC1 249 aaPredicted RBP8.53□□□□□ -1.04
CDH1-214ENST00000621016 TMEM178BH3BS89 294 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 GATA4P43694 442 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 FOXC1Q12948 553 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 C3orf36Q3SXR2 165 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 C2orf83Q53S99 150 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 PDPNQ86YL7 162 aa8.52□□□□□ -1.04
CDH1-214ENST00000621016 CREBBPQ92793 2442 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 TRBV9A0A0B4J1U6 114 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 THBDP07204 575 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 FOXI2Q6ZQN5 318 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 FAM167A-AS1Q96KT0 104 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 PGLYRP4Q96LB8 373 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 C9JCJ5 164 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 H3BVH4 76 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 PEX7O00628 323 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 GRNP28799 593 aaKnown RBP8.52□□□□□ -1.05
CDH1-214ENST00000621016 SUB1P53999 127 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDH1-214ENST00000621016 HES1Q14469 280 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 VMA21Q3ZAQ7 101 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 TTC32Q5I0X7 151 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 FAM120AOSQ5T036 256 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 PRSS33Q8NF86 280 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 ONECUT1Q9UBC0 465 aa8.52□□□□□ -1.05
CDH1-214ENST00000621016 IGLV2-8P01709 118 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 EXOC3-AS1Q8N2X6 119 aa8.51□□□□□ -1.05
CDH1-214ENST00000621016 RNASE6Q93091 150 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms