RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 OR11H2Q8NH07 326 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 FXYD5Q96DB9 178 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 RITA1Q96K30 269 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 FOXC2Q99958 501 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 CHD8Q9HCK8 2581 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 K7EMI3 77 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 DEFB125Q8N687 156 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 CEACAM4O75871 244 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 APOMO95445 188 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 DLX6P56179 175 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 KLF17Q5JT82 389 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-216ENST00000620854 K7EM74 188 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 ARMS2P0C7Q2 107 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 ATP5IP56385 69 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-216ENST00000620854 CACNG7P62955 275 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 GUSBP1Q15486 140 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 FAM120AOSQ5T036 256 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 TMEM170BQ5T4T1 132 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 PET117Q6UWS5 81 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 C21orf62Q9NYP8 219 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 DPM3Q9P2X0 92 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 SPCS1Q9Y6A9 102 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 LINC00312Q9Y6C7 94 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 ORMDL3Q8N138 153 aa5.57□□□□□ -1.52
NEDD9-216ENST00000620854 NEU4Q8WWR8 484 aaPredicted RBP5.57□□□□□ -1.52
NEDD9-216ENST00000620854 CFHR2P36980 270 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 LOXL1Q08397 574 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 KLF5Q13887 457 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 PPP1R27Q86WC6 154 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 ZNF418Q8TF45 676 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 C17orf77Q96MU5 243 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 CCL19Q99731 98 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 NHP2Q9NX24 153 aaKnown RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 TCRBV4S1A1TA0A5B7 111 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 NPIPB5A8MRT5 1133 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 IGHV3-11P01762 117 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 SMIM13P0DJ93 91 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 EVI2AP22794 236 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 IFI27P40305 119 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 GLMPQ8WWB7 406 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 LINC00527Q9UJ94 153 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 A0A1B0GWB2 263 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 C22orf46C9J442 243 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 TM4SF5O14894 197 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 NDUFA3O95167 84 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 FER1L6-AS1Q8NA97 138 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 WIPF2Q8TF74 440 aaPredicted RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 IGFBPL1Q8WX77 278 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 PIMREGQ9BSJ6 248 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 TTTY13Q9BZ97 58 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 CSTL1Q9H114 145 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 NDUFA4L2Q9NRX3 87 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 RPUSD1Q9UJJ7 312 aaKnown RBP5.56□□□□□ -1.52
NEDD9-216ENST00000620854 FAM215AQ9Y5M1 114 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 CCDC168Q8NDH2 2452 aa5.56□□□□□ -1.52
NEDD9-216ENST00000620854 COL12A1Q99715 3063 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 IGKV1D-37A0A075B6S9 117 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 TMEM238LA0A1B0GVL6 79 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 PSMB11A5LHX3 300 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 A6NJY4 79 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 IGHV1-46P01743 117 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 FAM71F2Q6NXP2 309 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 CLEC19AQ6UXS0 136 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 C22orf34Q6ZV56 151 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 TTC9CQ8N5M4 171 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 SCRT2Q9NQ03 307 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 JKAMPQ9P055 326 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 A0A1B0GXF2 115 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 TCRAP04437 139 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 CGB3P0DN86 165 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 CGB7P0DN87 165 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 CNTFRP26992 372 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 RPS20P60866 119 aaKnown RBP5.55□□□□□ -1.52
NEDD9-216ENST00000620854 FAM231DQ6ZW35 169 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 PSG8Q9UQ74 426 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 AGRNO00468 2067 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 IGKV3OR2-268A0A0C4DH90 116 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 SMKR1H3BMG3 65 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 CD5LO43866 347 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 RHOGP84095 191 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 ZNF56Q15929 161 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 Q5PR19 223 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 RNF125Q96EQ8 232 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 FMC1Q96HJ9 113 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 MRPL16Q9NX20 251 aaKnown RBP5.55□□□□□ -1.52
NEDD9-216ENST00000620854 ABCA2Q9BZC7 2435 aa5.55□□□□□ -1.52
NEDD9-216ENST00000620854 A0A1W2PPI3 338 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 TMEM30BQ3MIR4 351 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 RASL11AQ6T310 242 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 SLC25A48Q6ZT89 311 aaKnown RBP5.54□□□□□ -1.52
NEDD9-216ENST00000620854 FAM169BQ8N8A8 192 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 JMJD8Q96S16 334 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 TIMM23O14925 209 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 LEPP41159 167 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 IGFL4Q6B9Z1 124 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 WFDC12Q8WWY7 111 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
NEDD9-216ENST00000620854 NACAE9PAV3 2078 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms