RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SMKR1H3BMG3 65 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 NUPR1O60356 82 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 DAZAP2Q15038 168 aaPredicted RBP11.06□□□□□ -0.64
CNOT3-210ENST00000618939 ORAOV1Q8WV07 137 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 RAX2Q96IS3 184 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 TMEM213A2RRL7 107 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 C8orf49Q96NF6 230 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 PATE2Q6UY27 113 aa11.06□□□□□ -0.64
CNOT3-210ENST00000618939 NCKAP5O14513 1909 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 ATP6V0E1O15342 81 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 CD7P09564 240 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 SEC11AP67812 179 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 CHD3Q12873 2000 aaKnown RBP11.05□□□□□ -0.64
CNOT3-210ENST00000618939 CGB3P0DN86 165 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 CGB7P0DN87 165 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 UBE2E1P51965 193 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
CNOT3-210ENST00000618939 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
CNOT3-210ENST00000618939 ACACBO00763 2458 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 FAM208BQ5VWN6 2430 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 A0A087X0K7 114 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 H3BUX3 64 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 IGKCP01834 107 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 ERCC8Q13216 396 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
CNOT3-210ENST00000618939 SRD5A1P18405 259 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 HSD52Q0P140 79 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 ZC2HC1AQ96GY0 325 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 H7C2G1 150 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 GNLYP22749 145 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 EIF4EBP1Q13541 118 aaPredicted RBP11.04□□□□□ -0.64
CNOT3-210ENST00000618939 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 HAX1O00165 279 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 LTAP01374 205 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 PRSS2P07478 247 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 NBL1P41271 181 aa11.04□□□□□ -0.64
CNOT3-210ENST00000618939 GRNP28799 593 aaKnown RBP11.03□□□□□ -0.64
CNOT3-210ENST00000618939 FAM104BQ5XKR9 115 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 RITA1Q96K30 269 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 ZNF256Q9Y2P7 627 aaPredicted RBP11.03□□□□□ -0.64
CNOT3-210ENST00000618939 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 UTF1Q5T230 341 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 WIPF2Q8TF74 440 aaPredicted RBP11.03□□□□□ -0.64
CNOT3-210ENST00000618939 NHP2Q9NX24 153 aaKnown RBP11.03□□□□□ -0.64
CNOT3-210ENST00000618939 SELENOKQ9Y6D0 94 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 LAGE3Q14657 143 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 PRR25Q96S07 402 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 G3V318 75 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 H7C1H1 209 aa11.03□□□□□ -0.64
CNOT3-210ENST00000618939 IGHV1-24A0A0C4DH33 117 aa11.02□□□□□ -0.64
CNOT3-210ENST00000618939 E7EUB6 86 aa11.02□□□□□ -0.64
CNOT3-210ENST00000618939 C17orf77Q96MU5 243 aa11.02□□□□□ -0.64
CNOT3-210ENST00000618939 SMPXQ9UHP9 88 aa11.02□□□□□ -0.64
CNOT3-210ENST00000618939 PRSS46E5RG02 174 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 IGLL1P15814 213 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 KIR2DL5AQ8N109 375 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 CYSLTR1Q9Y271 337 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 PIEZO2Q9H5I5 2752 aa11.02□□□□□ -0.65
CNOT3-210ENST00000618939 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 IGF2BP2-AS1Q96M15 143 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 TCF15Q12870 199 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 INS-IGF2F8WCM5 200 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 GP9P14770 177 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 WFDC12Q8WWY7 111 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
CNOT3-210ENST00000618939 MRPL16Q9NX20 251 aaKnown RBP11.01□□□□□ -0.65
CNOT3-210ENST00000618939 MRPL36Q9P0J6 103 aaKnown RBP11.01□□□□□ -0.65
CNOT3-210ENST00000618939 CPAMD8Q8IZJ3 1885 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 IGHV2-70DA0A0C4DH43 119 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 UNQ6494/PRO21346Q6UXR6 183 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 GTSCR1Q86UQ5 136 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 DYSFO75923 2080 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 OR2K2Q8NGT1 345 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 PRSS22Q9GZN4 317 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 JKAMPQ9P055 326 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 IGLV2-23P01705 113 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 LDLRAD2Q5SZI1 272 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 TEX29Q8N6K0 151 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 USMG5Q96IX5 58 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 TNFRSF18Q9Y5U5 241 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 CUL9Q8IWT3 2517 aa11□□□□□ -0.65
CNOT3-210ENST00000618939 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
CNOT3-210ENST00000618939 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1302.8 ms