RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SRIP30626 198 aa3□□□□□ -1.93
SNCA-213ENST00000618500 TNFSF8P32971 234 aa3□□□□□ -1.93
SNCA-213ENST00000618500 PRSS3P35030 304 aa3□□□□□ -1.93
SNCA-213ENST00000618500 LYZP61626 148 aa3□□□□□ -1.93
SNCA-213ENST00000618500 GUK1Q16774 197 aa3□□□□□ -1.93
SNCA-213ENST00000618500 C14orf177Q52M58 125 aa3□□□□□ -1.93
SNCA-213ENST00000618500 Q6ZTI0 123 aa3□□□□□ -1.93
SNCA-213ENST00000618500 WFDC10BQ8IUB3 73 aa3□□□□□ -1.93
SNCA-213ENST00000618500 SELENOHQ8IZQ5 122 aaKnown RBP3□□□□□ -1.93
SNCA-213ENST00000618500 OR51S1Q8NGJ8 323 aa3□□□□□ -1.93
SNCA-213ENST00000618500 DAZAP1Q96EP5 407 aaKnown RBP3□□□□□ -1.93
SNCA-213ENST00000618500 RSG1Q9BU20 258 aa3□□□□□ -1.93
SNCA-213ENST00000618500 TMEM147Q9BVK8 224 aa3□□□□□ -1.93
SNCA-213ENST00000618500 CACNG5Q9UF02 275 aa3□□□□□ -1.93
SNCA-213ENST00000618500 SSR3Q9UNL2 185 aa3□□□□□ -1.93
SNCA-213ENST00000618500 RABL2BQ9UNT1 228 aa3□□□□□ -1.93
SNCA-213ENST00000618500 PRELID1Q9Y255 219 aa3□□□□□ -1.93
SNCA-213ENST00000618500 ZFP92A6NM28 416 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 PSCAO43653 123 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 PIGPP57054 158 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 RPP30P78346 268 aaKnown RBP2.99□□□□□ -1.93
SNCA-213ENST00000618500 SPINK9Q5DT21 86 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 LGI3Q8N145 548 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 PCNPQ8WW12 178 aaKnown RBP2.99□□□□□ -1.93
SNCA-213ENST00000618500 RMI2Q96E14 147 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 ACY3Q96HD9 319 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 LINC01600Q96MT4 127 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 ZNF331Q9NQX6 463 aaPredicted RBP2.99□□□□□ -1.93
SNCA-213ENST00000618500 HHLA3Q9XRX5 114 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 FUT9Q9Y231 359 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 TRAV12-2A0A075B6T6 113 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 TRAV8-3A0A0A6YYJ7 113 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 C7orf71A4D174 169 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 CRYM-AS1A6NIL9 109 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 RFX2P48378 723 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 SELENOTP62341 195 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 RAB11AP62491 216 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 SRPXP78539 464 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 HIST1H1AQ02539 215 aaPredicted RBP2.99□□□□□ -1.93
SNCA-213ENST00000618500 ZNF90Q03938 601 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 CIRBP-AS1Q8TBR5 109 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 RPUSD4Q96CM3 377 aaKnown RBP2.99□□□□□ -1.93
SNCA-213ENST00000618500 SPXQ9BT56 116 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 C1orf43Q9BWL3 253 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 SLC25A39Q9BZJ4 359 aaPredicted RBP2.99□□□□□ -1.93
SNCA-213ENST00000618500 NAA60Q9H7X0 242 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 PPP1R14DQ9NXH3 145 aa2.99□□□□□ -1.93
SNCA-213ENST00000618500 TRAV8-1A0A0A6YYK1 113 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TRAV4A0A0B4J268 109 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 CEBPZOSA8MTT3 80 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 PTGES3LE9PB15 166 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 PITX3O75364 302 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 LINC00694P0DN24 101 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 SMCO1Q147U7 214 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 LELP1Q5T871 98 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 ATP6V0E2Q8NHE4 81 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TERB2Q8NHR7 220 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 DTD1Q8TEA8 209 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 C15orf40Q8WUR7 153 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 PBDC1Q9BVG4 233 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 SLC25A31Q9H0C2 315 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TNFRSF18Q9Y5U5 241 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TRAV8-6A0A0B4J262 113 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 PRM2P04554 102 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 GYPEP15421 78 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 HNRNPA3P51991 378 aaKnown RBP2.98□□□□□ -1.93
SNCA-213ENST00000618500 RHOBP62745 196 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TMEM229BQ8NBD8 167 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 NUDT10Q8NFP7 164 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 RASL10AQ92737 203 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 NUDT11Q96G61 164 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 CIB3Q96Q77 187 aaPredicted RBP2.98□□□□□ -1.93
SNCA-213ENST00000618500 CHCHD7Q9BUK0 85 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 RBKSQ9H477 322 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 RABL2AQ9UBK7 228 aaPredicted RBP2.98□□□□□ -1.93
SNCA-213ENST00000618500 HIGD1AQ9Y241 93 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TRGV2A0A075B6R0 118 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 IGKV1OR2-108A0A075B7D4 117 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 A0A0B4J2A0 478 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 MED6O75586 246 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 CT45A10P0DMU9 189 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 TRIM16LQ309B1 348 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 ZNF546Q86UE3 836 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 ZNF431Q8TF32 576 aaPredicted RBP2.98□□□□□ -1.93
SNCA-213ENST00000618500 GLYATL2Q8WU03 294 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 PPP1R14BQ96C90 147 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 COPZ2Q9P299 210 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 SHPKQ9UHJ6 478 aa2.98□□□□□ -1.93
SNCA-213ENST00000618500 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 IGHV3-38A0A0C4DH36 116 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 APOA1P02647 267 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 PFN1P07737 140 aaKnown RBP2.97□□□□□ -1.93
SNCA-213ENST00000618500 IGLC2P0DOY2 106 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 AKR1C4P17516 323 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 TSPAN5P62079 268 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 HAMPP81172 84 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 RPL19P84098 196 aaKnown RBP2.97□□□□□ -1.93
SNCA-213ENST00000618500 IZUMO4Q1ZYL8 232 aa2.97□□□□□ -1.93
SNCA-213ENST00000618500 CYP2G1PQ6ZSU1 146 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms