RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 PGPA6NDG6 321 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 RBFOX3A6NFN3 312 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 ZNF705FA8MVS1 300 aaPredicted RBP11.36□□□□□ -0.59
UPK1A-204ENST00000617999 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
UPK1A-204ENST00000617999 CD81P60033 236 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
UPK1A-204ENST00000617999 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
UPK1A-204ENST00000617999 MEF2BQ02080 365 aaPredicted RBP11.36□□□□□ -0.59
UPK1A-204ENST00000617999 ZNF124Q15973 351 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 PSG3Q16557 428 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
UPK1A-204ENST00000617999 VAX2Q9UIW0 290 aa11.36□□□□□ -0.59
UPK1A-204ENST00000617999 MGAM2Q2M2H8 2515 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
UPK1A-204ENST00000617999 LINC00862A6NCI5 91 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 F6UB75 175 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
UPK1A-204ENST00000617999 ID1P41134 155 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 DEFB131AP59861 70 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 KRTAP10-11P60412 298 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 SNRPD3P62318 126 aaKnown RBP11.35□□□□□ -0.59
UPK1A-204ENST00000617999 EGFEM1PQ0D2K5 195 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 COMMD7Q86VX2 200 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 C19orf73Q9NVV2 129 aa11.35□□□□□ -0.59
UPK1A-204ENST00000617999 C9JQL5 133 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 PEX7O00628 323 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 GDF5OSQ5U4N7 250 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 C11orf52Q96A22 123 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
UPK1A-204ENST00000617999 PRR25Q96S07 402 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
UPK1A-204ENST00000617999 DIRC3C9JPN6 131 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 TCRAP04437 139 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 TAGLN2P37802 199 aaKnown RBP11.33□□□□□ -0.6
UPK1A-204ENST00000617999 GOLT1AQ6ZVE7 132 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 ATG101Q9BSB4 218 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
UPK1A-204ENST00000617999 EIF5A2Q9GZV4 153 aaKnown RBP11.33□□□□□ -0.6
UPK1A-204ENST00000617999 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
UPK1A-204ENST00000617999 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
UPK1A-204ENST00000617999 OR11H12B2RN74 326 aa11.32□□□□□ -0.6
UPK1A-204ENST00000617999 ZNF705DP0CH99 300 aaPredicted RBP11.32□□□□□ -0.6
UPK1A-204ENST00000617999 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
UPK1A-204ENST00000617999 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
UPK1A-204ENST00000617999 TXNDC17Q9BRA2 123 aa11.32□□□□□ -0.6
UPK1A-204ENST00000617999 EPDR1Q9UM22 224 aa11.32□□□□□ -0.6
UPK1A-204ENST00000617999 TRAV8-1A0A0A6YYK1 113 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 SRP19P09132 144 aaKnown RBP11.31□□□□□ -0.6
UPK1A-204ENST00000617999 AKR1C3P42330 323 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 CSN1S1P47710 185 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
UPK1A-204ENST00000617999 FOXI2Q6ZQN5 318 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 OR8A1Q8NGG7 326 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 VGLL1Q99990 258 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 FAM110AQ9BQ89 295 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
UPK1A-204ENST00000617999 NOTCH1P46531 2555 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 A0A0J9YX75 114 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 F6UZH7 168 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 ERCC8Q13216 396 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 Q86TA4 180 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 Q8TAT8 98 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 HIST1H2BAQ96A08 127 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 LINC00479Q96M42 142 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 CITED4Q96RK1 184 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 ASCL2Q99929 193 aa11.3□□□□□ -0.6
UPK1A-204ENST00000617999 SAV1Q9H4B6 383 aaPredicted RBP11.3□□□□□ -0.6
UPK1A-204ENST00000617999 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
UPK1A-204ENST00000617999 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
UPK1A-204ENST00000617999 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 PDE6DO43924 150 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
UPK1A-204ENST00000617999 HLA-DRB4P13762 266 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 ACTL10Q5JWF8 245 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 KPRPQ5T749 579 aaPredicted RBP11.29□□□□□ -0.6
UPK1A-204ENST00000617999 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 HLA-DRB4X5D2U9 266 aa11.29□□□□□ -0.6
UPK1A-204ENST00000617999 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
UPK1A-204ENST00000617999 CNN1P51911 297 aaKnown RBP11.28□□□□□ -0.6
UPK1A-204ENST00000617999 PEA15Q15121 130 aa11.28□□□□□ -0.6
UPK1A-204ENST00000617999 Q8N1Y9 231 aa11.28□□□□□ -0.6
UPK1A-204ENST00000617999 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
UPK1A-204ENST00000617999 TMEM75Q8N9X5 138 aa11.28□□□□□ -0.6
UPK1A-204ENST00000617999 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
UPK1A-204ENST00000617999 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
UPK1A-204ENST00000617999 RBAKDNA6NC62 111 aa11.27□□□□□ -0.61
UPK1A-204ENST00000617999 A8MTW9 85 aa11.27□□□□□ -0.61
UPK1A-204ENST00000617999 NDUFS6O75380 124 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms