RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ZNF331Q9NQX6 463 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 KLF12Q9Y4X4 402 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 ID1P41134 155 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 RNF212Q495C1 297 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 C10orf99Q6UWK7 81 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 CBLN2Q8IUK8 224 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 KLHL30-AS1Q8NEE0 82 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 OR10G8Q8NGN5 311 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 OCC1Q8TAD7 63 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 SFRP2Q96HF1 295 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 RHPN1-AS1Q9BWJ2 59 aa12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC3-210ENST00000617904 A8MWP6 167 aa12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 ERVFC1-1P60608 527 aa12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 GNG5P63218 68 aa12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 GOLT1AQ6ZVE7 132 aa12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 DAZAP1Q96EP5 407 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-210ENST00000617904 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 IGHV3-66A0A0C4DH42 116 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 DIRC3C9JPN6 131 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 HOXD3P31249 432 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 LINC01006Q8NI28 216 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 RNF114Q9Y508 228 aa12.81□□□□□ -0.36
TRAPPC3-210ENST00000617904 PKD1L1Q8TDX9 2849 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 IGHV4OR15-8A0A075B7B6 117 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 IGHV3OR16-13A0A075B7E8 117 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 A0A087WW49 117 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 IGHV3-74A0A0B4J1X5 117 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 RBAKDNA6NC62 111 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 CHEK1O14757 476 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 FLI1Q01543 452 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 PSG3Q16557 428 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 C17orf77Q96MU5 243 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 OSTCQ9NRP0 149 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 SMAD5-AS1Q9Y6J3 95 aa12.8□□□□□ -0.36
TRAPPC3-210ENST00000617904 CMYA5Q8N3K9 4069 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 SLC17A3O00476 420 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 ISLRO14498 428 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 GCGP01275 180 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 APOHP02749 345 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 SYNJ2BPP57105 145 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 TM4SF20Q53R12 229 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 C8orf86Q6ZUL3 223 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 OR11H1Q8NG94 326 aa12.79□□□□□ -0.36
TRAPPC3-210ENST00000617904 TRBV20OR9-2A0A075B6H5 130 aa12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 IBA57Q5T440 356 aaKnown RBP12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 PRNTQ86SH4 94 aa12.78□□□□□ -0.36
TRAPPC3-210ENST00000617904 OVOL1O14753 267 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 LTAP01374 205 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 Q86TA4 180 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 MLXQ9UH92 298 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 PSG8Q9UQ74 426 aa12.77□□□□□ -0.37
TRAPPC3-210ENST00000617904 TRAV9-1A0A075B6T8 112 aa12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 PGPEP1LA6NFU8 196 aa12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 GATCO43716 136 aaKnown RBP12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 DEFA6Q01524 100 aa12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 FAM24BQ8N5W8 94 aa12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 OR10J6PQ8NGY7 276 aa12.76□□□□□ -0.37
TRAPPC3-210ENST00000617904 SNRPD3P62318 126 aaKnown RBP12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 ZNF738Q8NE65 137 aa12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 LINC00479Q96M42 142 aa12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 AURKAIP1Q9NWT8 199 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 ZNF492Q9P255 531 aa12.75□□□□□ -0.37
TRAPPC3-210ENST00000617904 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 C2orf70A6NJV1 201 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 ZNF705GA8MUZ8 300 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 M0R3E3 92 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 CBLN1P23435 193 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 OR4B1Q8NGF8 309 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 OR9G4Q8NGQ1 327 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 URGCP-MRPS24S4R325 110 aa12.74□□□□□ -0.37
TRAPPC3-210ENST00000617904 XKRY2A2RUG3 117 aa12.73□□□□□ -0.37
TRAPPC3-210ENST00000617904 K7EN84 100 aa12.73□□□□□ -0.37
TRAPPC3-210ENST00000617904 P01737 135 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms