RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 B4DEV8 164 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 CNN1P51911 297 aaKnown RBP8.84□□□□□ -0.99
PDPN-211ENST00000617617 PSG3Q16557 428 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 CMTM2Q8TAZ6 248 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 ZNF727A8MUV8 499 aa8.83□□□□□ -1
PDPN-211ENST00000617617 IGLV2-11P01706 119 aa8.83□□□□□ -1
PDPN-211ENST00000617617 RPL35P42766 123 aaKnown RBP8.83□□□□□ -1
PDPN-211ENST00000617617 CSN1S1P47710 185 aa8.83□□□□□ -1
PDPN-211ENST00000617617 DUX3Q96PT4 197 aa8.83□□□□□ -1
PDPN-211ENST00000617617 SMIM7Q9BQ49 75 aa8.83□□□□□ -1
PDPN-211ENST00000617617 MS4A6AQ9H2W1 248 aa8.83□□□□□ -1
PDPN-211ENST00000617617 IGHV3OR16-13A0A075B7E8 117 aa8.83□□□□□ -1
PDPN-211ENST00000617617 IGHV3-74A0A0B4J1X5 117 aa8.83□□□□□ -1
PDPN-211ENST00000617617 K7EQM0 130 aa8.83□□□□□ -1
PDPN-211ENST00000617617 ID1P41134 155 aa8.83□□□□□ -1
PDPN-211ENST00000617617 AKR1C3P42330 323 aa8.83□□□□□ -1
PDPN-211ENST00000617617 TMEM241Q24JQ0 296 aa8.83□□□□□ -1
PDPN-211ENST00000617617 NSUN5P1Q3KNT7 163 aa8.83□□□□□ -1
PDPN-211ENST00000617617 TVP23CQ96ET8 276 aa8.83□□□□□ -1
PDPN-211ENST00000617617 LTAP01374 205 aa8.82□□□□□ -1
PDPN-211ENST00000617617 LCN12Q6JVE5 192 aa8.82□□□□□ -1
PDPN-211ENST00000617617 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
PDPN-211ENST00000617617 TRBV7-9A0A0J9YWB2 115 aa8.82□□□□□ -1
PDPN-211ENST00000617617 H3BTX0 84 aa8.82□□□□□ -1
PDPN-211ENST00000617617 SNAPINO95295 136 aa8.82□□□□□ -1
PDPN-211ENST00000617617 RHEBQ15382 184 aa8.82□□□□□ -1
PDPN-211ENST00000617617 C16orf92Q96LL3 132 aa8.82□□□□□ -1
PDPN-211ENST00000617617 SPAG8Q99932 426 aaPredicted RBP8.82□□□□□ -1
PDPN-211ENST00000617617 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
PDPN-211ENST00000617617 WIPF1O43516 503 aa8.81□□□□□ -1
PDPN-211ENST00000617617 INSL3P51460 131 aa8.81□□□□□ -1
PDPN-211ENST00000617617 PAFAH1B2P68402 229 aa8.81□□□□□ -1
PDPN-211ENST00000617617 SHISA2Q6UWI4 295 aa8.81□□□□□ -1
PDPN-211ENST00000617617 C9orf47Q6ZRZ4 202 aa8.81□□□□□ -1
PDPN-211ENST00000617617 FAM110AQ9BQ89 295 aa8.81□□□□□ -1
PDPN-211ENST00000617617 DERL1Q9BUN8 251 aa8.81□□□□□ -1
PDPN-211ENST00000617617 MLST8Q9BVC4 326 aa8.81□□□□□ -1
PDPN-211ENST00000617617 ZFP30Q9Y2G7 519 aa8.81□□□□□ -1
PDPN-211ENST00000617617 A0A087WWC5 75 aa8.81□□□□□ -1
PDPN-211ENST00000617617 IGLV1-51P01701 117 aa8.81□□□□□ -1
PDPN-211ENST00000617617 GNG5P63218 68 aa8.81□□□□□ -1
PDPN-211ENST00000617617 GUCA2BQ16661 112 aa8.81□□□□□ -1
PDPN-211ENST00000617617 CLRN3Q8NCR9 226 aa8.81□□□□□ -1
PDPN-211ENST00000617617 WFDC9Q8NEX5 89 aa8.81□□□□□ -1
PDPN-211ENST00000617617 LENEPQ9Y5L5 61 aa8.81□□□□□ -1
PDPN-211ENST00000617617 SCO1O75880 301 aa8.81□□□□□ -1
PDPN-211ENST00000617617 IGLV2-8P01709 118 aa8.81□□□□□ -1
PDPN-211ENST00000617617 Q86TA4 180 aa8.81□□□□□ -1
PDPN-211ENST00000617617 C20orf173Q96LM9 149 aa8.81□□□□□ -1
PDPN-211ENST00000617617 MAST4O15021 2626 aa8.8□□□□□ -1
PDPN-211ENST00000617617 A8MTW9 85 aa8.8□□□□□ -1
PDPN-211ENST00000617617 RPL23P62829 140 aaKnown RBP8.8□□□□□ -1
PDPN-211ENST00000617617 LINC01551Q86U37 167 aa8.8□□□□□ -1
PDPN-211ENST00000617617 DYNLRB2Q8TF09 96 aa8.8□□□□□ -1
PDPN-211ENST00000617617 BIN3Q9NQY0 253 aa8.8□□□□□ -1
PDPN-211ENST00000617617 TMEM242Q9NWH2 141 aa8.8□□□□□ -1
PDPN-211ENST00000617617 NPIPB6E9PJ23 425 aa8.8□□□□□ -1
PDPN-211ENST00000617617 GCGP01275 180 aa8.8□□□□□ -1
PDPN-211ENST00000617617 APOC3P02656 99 aa8.8□□□□□ -1
PDPN-211ENST00000617617 GNG4P50150 75 aa8.8□□□□□ -1
PDPN-211ENST00000617617 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
PDPN-211ENST00000617617 CENPWQ5EE01 88 aa8.8□□□□□ -1
PDPN-211ENST00000617617 HIST2H2BDQ6DRA6 164 aa8.8□□□□□ -1
PDPN-211ENST00000617617 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
PDPN-211ENST00000617617 ODF3Q96PU9 254 aa8.8□□□□□ -1
PDPN-211ENST00000617617 M0R3E3 92 aa8.79□□□□□ -1
PDPN-211ENST00000617617 GOLT1AQ6ZVE7 132 aa8.79□□□□□ -1
PDPN-211ENST00000617617 TMEM183AQ8IXX5 376 aa8.79□□□□□ -1
PDPN-211ENST00000617617 FAM19A4Q96LR4 140 aa8.79□□□□□ -1
PDPN-211ENST00000617617 MCRIP2Q9BUT9 160 aaKnown RBP8.79□□□□□ -1
PDPN-211ENST00000617617 ZNF256Q9Y2P7 627 aaPredicted RBP8.79□□□□□ -1
PDPN-211ENST00000617617 PF4P02776 101 aa8.79□□□□□ -1
PDPN-211ENST00000617617 SNRPCP09234 159 aaKnown RBP8.79□□□□□ -1
PDPN-211ENST00000617617 UBE2G1P62253 170 aa8.79□□□□□ -1
PDPN-211ENST00000617617 SNRPD3P62318 126 aaKnown RBP8.79□□□□□ -1
PDPN-211ENST00000617617 TMEM61Q8N0U2 210 aa8.79□□□□□ -1
PDPN-211ENST00000617617 ISOC2Q96AB3 205 aa8.79□□□□□ -1
PDPN-211ENST00000617617 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
PDPN-211ENST00000617617 HLA-DMBP28068 263 aa8.78□□□□□ -1
PDPN-211ENST00000617617 FLI1Q01543 452 aaPredicted RBP8.78□□□□□ -1
PDPN-211ENST00000617617 ZNF674Q2M3X9 581 aa8.78□□□□□ -1
PDPN-211ENST00000617617 CD300EQ496F6 205 aaPredicted RBP8.78□□□□□ -1
PDPN-211ENST00000617617 SAPCD1Q5SSQ6 148 aa8.78□□□□□ -1
PDPN-211ENST00000617617 FAM231DQ6ZW35 169 aa8.78□□□□□ -1
PDPN-211ENST00000617617 LINC00477Q96M19 166 aa8.78□□□□□ -1
PDPN-211ENST00000617617 ZNF492Q9P255 531 aa8.78□□□□□ -1
PDPN-211ENST00000617617 PSG8Q9UQ74 426 aa8.78□□□□□ -1
PDPN-211ENST00000617617 OR4C46A6NHA9 309 aa8.78□□□□□ -1
PDPN-211ENST00000617617 RBPMS2Q6ZRY4 209 aaKnown RBP8.78□□□□□ -1
PDPN-211ENST00000617617 APRG1Q8IVJ8 170 aa8.78□□□□□ -1
PDPN-211ENST00000617617 RNF182Q8N6D2 247 aa8.78□□□□□ -1
PDPN-211ENST00000617617 OCC1Q8TAD7 63 aa8.78□□□□□ -1
PDPN-211ENST00000617617 CTDSP1Q9GZU7 261 aa8.78□□□□□ -1
PDPN-211ENST00000617617 ANK2Q01484 3957 aa8.77□□□□□ -1
PDPN-211ENST00000617617 CEBPGP53567 150 aa8.77□□□□□ -1
PDPN-211ENST00000617617 LINC00479Q96M42 142 aa8.77□□□□□ -1
PDPN-211ENST00000617617 CMYA5Q8N3K9 4069 aa8.77□□□□□ -1
PDPN-211ENST00000617617 DNASE2O00115 360 aaPredicted RBP8.77□□□□□ -1.01
PDPN-211ENST00000617617 RPL11P62913 178 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms