RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 ZNF503Q96F45 646 aa12.13□□□□□ -0.47
SPTSSB-204ENST00000617024 C20orf173Q96LM9 149 aa12.13□□□□□ -0.47
SPTSSB-204ENST00000617024 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
SPTSSB-204ENST00000617024 SMDT1Q9H4I9 107 aa12.13□□□□□ -0.47
SPTSSB-204ENST00000617024 CLEC5AQ9NY25 188 aa12.13□□□□□ -0.47
SPTSSB-204ENST00000617024 LOC102724200A0A096LPH7 203 aaPredicted RBP12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 ZNF253O75346 499 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 STAG3L2P0CL84 134 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 STAG3L3P0CL85 134 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 FHITP49789 147 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 PSG9Q00887 426 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 PDE6HQ13956 83 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 PSG3Q16557 428 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 STHQ8IWL8 128 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 RNF182Q8N6D2 247 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 SFT2D1Q8WV19 159 aa12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 HUWE1Q7Z6Z7 4374 aaKnown RBP12.12□□□□□ -0.47
SPTSSB-204ENST00000617024 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 SLC17A3O00476 420 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 CXorf1O96002 111 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 UBE2L3P68036 154 aaKnown RBP12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 SVBPQ8N300 66 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 SEC11CQ9BY50 192 aa12.11□□□□□ -0.47
SPTSSB-204ENST00000617024 NDUFB4O95168 129 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 IFNA1P01562 189 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 RPL35AP18077 110 aaKnown RBP12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 HLA-DMBP28068 263 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 ZNF726P1Q15940 193 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 FOXI2Q6ZQN5 318 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
SPTSSB-204ENST00000617024 GCHFRP30047 84 aa12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 LYPD1Q8N2G4 141 aa12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 B9D2Q9BPU9 175 aa12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 AAMDCQ9H7C9 122 aa12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 CARHSP1Q9Y2V2 147 aaKnown RBP12.09□□□□□ -0.47
SPTSSB-204ENST00000617024 A0A1B0GV50 99 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 H3BMM0 161 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 SNAPINO95295 136 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 SFTA3P0C7M3 94 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 APOC4P55056 127 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 DEFB1P60022 68 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 RANP62826 216 aaKnown RBP12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 HAGHQ16775 308 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 ASCL2Q99929 193 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 TMEM167BQ9NRX6 74 aa12.08□□□□□ -0.48
SPTSSB-204ENST00000617024 A0A0J9YX75 114 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 F6UB75 175 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 DUSP14O95147 198 aaKnown RBP12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 SRSF3P84103 164 aaKnown RBP12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 ICAM4Q14773 271 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 C10orf91Q5T1B1 145 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 SBSPONQ8IVN8 264 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 IQCF2Q8IXL9 164 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 CSTL1Q9H114 145 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 SLC35B3Q9H1N7 401 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
SPTSSB-204ENST00000617024 KIR2DL5BA0A0G2JN68 375 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 KIR2DL5BA0A0G2JPC4 375 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 MAP1LC3B2A6NCE7 125 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 PPT1P50897 306 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 KIR2DL5AQ8N109 375 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 KIR2DL5BQ8NHK3 375 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 SUN5Q8TC36 379 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 MRPL53Q96EL3 112 aaKnown RBP12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 MAP1LC3BQ9GZQ8 125 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 Q9H3A6 140 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 AGRNO00468 2067 aa12.06□□□□□ -0.48
SPTSSB-204ENST00000617024 TENM2Q9NT68 2774 aa12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 PGPA6NDG6 321 aa12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 UBE2CO00762 179 aa12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 ZNF506Q5JVG8 444 aa12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 CLUHP3Q96NS8 147 aa12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
SPTSSB-204ENST00000617024 M0R3E3 92 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms