RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CRYBA4P53673 196 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 FAM104BQ5XKR9 115 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 DEFB123Q8N688 67 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 TMEM167AQ8TBQ9 72 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 NGBQ9NPG2 151 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 LOC400499M0QZD8 3231 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 TRBV25-1A0A075B6N4 114 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 A0A096LNJ9 63 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 TMEM8BA6NDV4 472 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 J3KRW8 73 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 APOMO95445 188 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 IGKCP01834 107 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 CCDC144NLQ6NUI1 221 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 TTC9CQ8N5M4 171 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 IGFBPL1Q8WX77 278 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 CYSLTR1Q9Y271 337 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 PIEZO2Q9H5I5 2752 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 NDUFB3O43676 98 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 SH2D1AO60880 128 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 CGB3P0DN86 165 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 CGB7P0DN87 165 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 HES1Q14469 280 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 SCGB1D4Q6XE38 83 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 UBALD2Q8IYN6 164 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 TMEM158Q8WZ71 300 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 IGHV3OR16-13A0A075B7E8 117 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 IGHV3-74A0A0B4J1X5 117 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 GAS8-AS1O95177 125 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 SPINK8P0C7L1 97 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 PSMB2P49721 201 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 SRSF9Q13242 221 aaKnown RBP eCLIP5.29□□□□□ -1.56
LMO3-235ENST00000616247 TMEM200BQ69YZ2 307 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 SYT8Q8NBV8 401 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 TRGV9Q99603 122 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 HIF1ANQ9NWT6 349 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 MRPL16Q9NX20 251 aaKnown RBP5.29□□□□□ -1.56
LMO3-235ENST00000616247 RIF1Q5UIP0 2472 aaKnown RBP5.29□□□□□ -1.56
LMO3-235ENST00000616247 CEP192Q8TEP8 1941 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 VSTM5A8MXK1 200 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 IGLL5B9A064 214 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 DPM2O94777 84 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 IGHV1-46P01743 117 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 CRIP1P50238 77 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 ANXA2RQ3ZCQ2 193 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 THAP8Q8NA92 274 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 MDS2Q8NDY4 140 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 MYOZ3Q8TDC0 251 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 RPEQ96AT9 228 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 RALYQ9UKM9 306 aaKnown RBP5.29□□□□□ -1.56
LMO3-235ENST00000616247 APC2O95996 2303 aa5.29□□□□□ -1.56
LMO3-235ENST00000616247 GLRXP35754 106 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 ARRDC1-AS1Q9H2J1 176 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 SPANXB1Q9NS25 103 aaPredicted RBP5.28□□□□□ -1.56
LMO3-235ENST00000616247 MRPL35Q9NZE8 188 aaKnown RBP5.28□□□□□ -1.56
LMO3-235ENST00000616247 SPTAN1Q13813 2472 aaKnown RBP5.28□□□□□ -1.56
LMO3-235ENST00000616247 PTPRBP23467 1997 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 NCBP2LA6PVI3 153 aaKnown RBP5.28□□□□□ -1.56
LMO3-235ENST00000616247 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 FAM27E3Q08E93 113 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 SRSF6Q13247 344 aaKnown RBP5.28□□□□□ -1.56
LMO3-235ENST00000616247 C12orf74Q32Q52 190 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 LYPD2Q6UXB3 125 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 CEND1Q8N111 149 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 PTH2Q96A98 100 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 LINC00312Q9Y6C7 94 aa5.28□□□□□ -1.56
LMO3-235ENST00000616247 ZFHX4Q86UP3 3567 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 TRBV19A0A075B6N1 114 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 PRR33A8MZF0 331 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 SIVA1O15304 175 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 FSTL3O95633 263 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 CR1LQ2VPA4 569 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 FOXI2Q6ZQN5 318 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 ZNF833PQ6ZTB9 187 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 ZNF502Q8TBZ5 544 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 ZNF71Q9NQZ8 489 aaPredicted RBP5.27□□□□□ -1.57
LMO3-235ENST00000616247 IGHV3-66A0A0C4DH42 116 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 A0A1B0GW15 77 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 F8W1H4 67 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 H7C2G1 150 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 IGLV2-11P01706 119 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 HLA-DMBP28068 263 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 EFNA4P52798 201 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 Q6AWC8 147 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 MAPKAPK5-AS1Q8N8E1 139 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 FDCSPQ8NFU4 85 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 DYNLRB1Q9NP97 96 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 PGPEP1Q9NXJ5 209 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 CREBBPQ92793 2442 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 TRAV26-2A0A0B4J265 109 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 ZNF785A8K8V0 405 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 TM4SF5O14894 197 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 TNFRSF6BO95407 300 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
LMO3-235ENST00000616247 RNF125Q96EQ8 232 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 VKORC1Q9BQB6 163 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 SS18L2Q9UHA2 77 aa5.27□□□□□ -1.57
LMO3-235ENST00000616247 SLC25A15Q9Y619 301 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms