RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 RNF144BQ7Z419 303 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 PLPPR1Q8TBJ4 325 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 ARMS2P0C7Q2 107 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 HEPN1Q6WQI6 88 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 SIGLEC1Q9BZZ2 1709 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 A0A1W2PRE2 83 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 CSRP3P50461 194 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 A0A1W2PR77 199 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 ZNF646O15015 1829 aaPredicted RBP10.25□□□□□ -0.77
TCF4-248ENST00000616053 USF3Q68DE3 2245 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 DUX4L9Q6RFH8 374 aaPredicted RBP10.25□□□□□ -0.77
TCF4-248ENST00000616053 ZNF831Q5JPB2 1677 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 FXYD1O00168 92 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 FAM104BQ5XKR9 115 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 SHISA9B4DS77 424 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 PCDH15Q96QU1 1955 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 IGHG2P01859 326 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 DEFB113Q30KQ7 82 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 K7ENP7 123 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 ZFP36L1Q07352 338 aaKnown RBP10.25□□□□□ -0.77
TCF4-248ENST00000616053 IGHV4OR15-8A0A075B7B6 117 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 A0A087WW49 117 aa10.25□□□□□ -0.77
TCF4-248ENST00000616053 C1orf100Q5SVJ3 147 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 ETV2O00321 342 aaPredicted RBP10.24□□□□□ -0.77
TCF4-248ENST00000616053 HERVK_113P63121 156 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 MSRB3Q8IXL7 192 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 VSIG2Q96IQ7 327 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 TET2Q6N021 2002 aaPredicted RBP10.24□□□□□ -0.77
TCF4-248ENST00000616053 FAM236DA0A1B0GTK5 79 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 FAM236CP0DP71 79 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 FSHBP01225 129 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 ACYP1P07311 99 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 ZFP36P26651 326 aaKnown RBP10.24□□□□□ -0.77
TCF4-248ENST00000616053 PIK3C2AO00443 1686 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 ZNF497Q6ZNH5 498 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 DEPPQ9NTK1 212 aa10.24□□□□□ -0.77
TCF4-248ENST00000616053 LTAP01374 205 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 RLFQ13129 1914 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 UTF1Q5T230 341 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 FAM219BQ5XKK7 198 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 LIMS2Q7Z4I7 341 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 C1QL4Q86Z23 238 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 TRGV9Q99603 122 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 GLRX5Q86SX6 157 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 TMEM190Q8WZ59 177 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 CITED1Q99966 193 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 TRBV5-5A0A0J9YX44 114 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 FOXE3Q13461 319 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 ZNF319Q9P2F9 582 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
TCF4-248ENST00000616053 A0A087WZ39 114 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 NREPQ16612 68 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 PLSCR4Q9NRQ2 329 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 LY6G6CO95867 125 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 MRPL27Q9P0M9 148 aaKnown RBP10.22□□□□□ -0.77
TCF4-248ENST00000616053 TMEM141Q96I45 108 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 NPSP0C0P6 89 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 WBP1Q96G27 269 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
TCF4-248ENST00000616053 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 CRYGSP22914 178 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 LAMTOR2Q9Y2Q5 125 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 KNDC1Q76NI1 1749 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 C9orf62Q8N4C0 152 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 FBLN5Q9UBX5 448 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 COX7A2LO14548 114 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 IGKV1-16P04430 117 aa10.21□□□□□ -0.77
TCF4-248ENST00000616053 CD55P08174 381 aa10.21□□□□□ -0.78
TCF4-248ENST00000616053 SPINK8P0C7L1 97 aa10.21□□□□□ -0.78
TCF4-248ENST00000616053 PRR30Q53SZ7 412 aaPredicted RBP10.21□□□□□ -0.78
TCF4-248ENST00000616053 NAA38Q9BRA0 125 aaKnown RBP10.21□□□□□ -0.78
TCF4-248ENST00000616053 C8orf86Q6ZUL3 223 aa10.21□□□□□ -0.78
TCF4-248ENST00000616053 ORMDL1Q9P0S3 153 aa10.21□□□□□ -0.78
TCF4-248ENST00000616053 BTAF1O14981 1849 aa10.21□□□□□ -0.78
TCF4-248ENST00000616053 TRAV4A0A0B4J268 109 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 IGKV1D-13A0A0B4J2D9 117 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 IGHV2-70DA0A0C4DH43 119 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 IGKV1-13P0DP09 117 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 IGFBP3P17936 291 aaPredicted RBP10.2□□□□□ -0.78
TCF4-248ENST00000616053 LAIR2Q6ISS4 152 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 ELANEP08246 267 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 IGKV1-8A0A0C4DH67 115 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 ZNF664Q8N3J9 261 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 PRYO14603 147 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 FHL1Q13642 323 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 VPREB3Q9UKI3 123 aa10.2□□□□□ -0.78
TCF4-248ENST00000616053 NDUFA1O15239 70 aa10.19□□□□□ -0.78
TCF4-248ENST00000616053 A0A096LNI7 61 aa10.19□□□□□ -0.78
TCF4-248ENST00000616053 NPBQ8NG41 125 aa10.19□□□□□ -0.78
TCF4-248ENST00000616053 U3KQE9 123 aa10.19□□□□□ -0.78
TCF4-248ENST00000616053 PRR20EP86478 221 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms