RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 IGLC7A0M8Q6 106 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 H3BRN7 92 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 PRB4P10163 310 aaPredicted RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 SRSF1Q07955 248 aaKnown RBP eCLIP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 ORMDL2Q53FV1 153 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 SPG11Q96JI7 2443 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 LINC01549A6NIU2 74 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 Q86TA4 180 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 LINC01551Q86U37 167 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 UBE2DNLQ8IWF7 75 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 TRBV19A0A075B6N1 114 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 GNB1LQ9BYB4 327 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 TMEM242Q9NWH2 141 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 TMEM14CQ9P0S9 112 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 APOC4P55056 127 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 OR9G4Q8NGQ1 327 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 SIRPDQ9H106 197 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 CYSLTR1Q9Y271 337 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 ABCA1O95477 2261 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 CA1P00915 261 aaPredicted RBP7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 CRPP02741 224 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 C8orf86Q6ZUL3 223 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 TCF23Q7RTU1 214 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 TMEM170AQ8WVE7 144 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 CHCHD5Q9BSY4 110 aa7.48□□□□□ -1.21
CLTCL1-208ENST00000615606 IGHV7-81A0A0B4J1V7 117 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 SERF1AO75920 110 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 TMEM75Q8N9X5 138 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 DERL1Q9BUN8 251 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 VCX2Q9H322 139 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 SNAI2O43623 268 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 SMIM13P0DJ93 91 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 Q8N7P7 452 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 DPH3P1Q9H4G8 78 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 CCL24O00175 119 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 IGLV1-47P01700 117 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 ERCC8Q13216 396 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 CFAP161Q6P656 301 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 LYZL1Q6UWQ5 148 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 PRSS57Q6UWY2 283 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 MTURNQ8N3F0 131 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 ST6GALNAC6Q969X2 333 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 FOXC2Q99958 501 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 GZMBP10144 247 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 FREM1Q5H8C1 2179 aa7.47□□□□□ -1.21
CLTCL1-208ENST00000615606 RASL11AQ6T310 242 aa7.46□□□□□ -1.21
CLTCL1-208ENST00000615606 RNF182Q8N6D2 247 aa7.46□□□□□ -1.21
CLTCL1-208ENST00000615606 NDUFAF3Q9BU61 184 aa7.46□□□□□ -1.21
CLTCL1-208ENST00000615606 XCL2Q9UBD3 114 aa7.46□□□□□ -1.21
CLTCL1-208ENST00000615606 NUP210LQ5VU65 1888 aa7.46□□□□□ -1.21
CLTCL1-208ENST00000615606 FSTL3O95633 263 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HOXD3P31249 432 aaPredicted RBP7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 TMEM86BQ8N661 226 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 A0A087WX48 190 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 LMO4P61968 165 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 SLC25A2Q9BXI2 301 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 ADMP35318 185 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 BLCAPP62952 87 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 TTC32Q5I0X7 151 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 C5orf56Q8N8D9 126 aa7.46□□□□□ -1.22
CLTCL1-208ENST00000615606 IGF2RP11717 2491 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 PLCE1Q9P212 2302 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 HBDP02042 147 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 MALP21145 153 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 NIT1Q86X76 327 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 Q8N9W7 124 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 ZNF114Q8NC26 417 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 SMPXQ9UHP9 88 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 TMEM95Q3KNT9 176 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 SPINK13Q1W4C9 94 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 VGLL1Q99990 258 aa7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 MRPS16Q9Y3D3 137 aaKnown RBP7.45□□□□□ -1.22
CLTCL1-208ENST00000615606 ADARB2-AS1A8MUL3 147 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 SCGB1A1P11684 91 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 ZNF491Q8N8L2 437 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 TOMM7Q9P0U1 55 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 COL5A1P20908 1838 aaPredicted RBP7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 C22orf34Q6ZV56 151 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 RHODO00212 210 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 RNASE1P07998 156 aaKnown RBP7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 CD28P10747 220 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms