RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 NBR2O15453 112 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
CHD1-212ENST00000614616 DSCR8Q96T75 97 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 ARRDC1-AS1Q9H2J1 176 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 MRPL51Q4U2R6 128 aaKnown RBP11.24□□□□□ -0.61
CHD1-212ENST00000614616 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
CHD1-212ENST00000614616 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 FOXG1P55316 489 aaPredicted RBP11.24□□□□□ -0.61
CHD1-212ENST00000614616 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 DSCAMO60469 2012 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 IGHV3OR16-13A0A075B7E8 117 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 IGHV3-74A0A0B4J1X5 117 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 WNT2P09544 360 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
CHD1-212ENST00000614616 VOPP1Q96AW1 172 aa11.24□□□□□ -0.61
CHD1-212ENST00000614616 LINC01565O15544 149 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 COX6A1P12074 109 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
CHD1-212ENST00000614616 CD24P25063 80 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 TMEM167AQ8TBQ9 72 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 NDUFV3P56181 108 aaKnown RBP11.23□□□□□ -0.61
CHD1-212ENST00000614616 PSG7Q13046 419 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 ZNF474Q6S9Z5 364 aaPredicted RBP11.23□□□□□ -0.61
CHD1-212ENST00000614616 LY6G5BQ8NDX9 201 aa11.23□□□□□ -0.61
CHD1-212ENST00000614616 KLK10O43240 276 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 LINC00477Q96M19 166 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 IGKV1-12A0A0C4DH73 117 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 IGKV1D-12P01611 117 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 STPG1Q5TH74 334 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 LINC01587Q99440 93 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 WFDC2Q14508 124 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 IMMP1LQ96LU5 166 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 K7EMI3 77 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 NDUFS7O75251 213 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 DTX1Q86Y01 620 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 PEMTQ9UBM1 199 aa11.22□□□□□ -0.61
CHD1-212ENST00000614616 EFEMP2O95967 443 aa11.21□□□□□ -0.61
CHD1-212ENST00000614616 FGFBP3Q8TAT2 258 aa11.21□□□□□ -0.61
CHD1-212ENST00000614616 TRAV13-2A0A0B4J235 113 aa11.21□□□□□ -0.61
CHD1-212ENST00000614616 ERCC8Q13216 396 aa11.21□□□□□ -0.61
CHD1-212ENST00000614616 A0A087WX48 190 aa11.21□□□□□ -0.62
CHD1-212ENST00000614616 CCL4P13236 92 aa11.21□□□□□ -0.62
CHD1-212ENST00000614616 PRR7Q8TB68 274 aa11.21□□□□□ -0.62
CHD1-212ENST00000614616 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.62
CHD1-212ENST00000614616 FOXC1Q12948 553 aa11.21□□□□□ -0.62
CHD1-212ENST00000614616 PAX9P55771 341 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 SVIPQ8NHG7 77 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 HIGD1BQ9P298 99 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 SHISA9B4DS77 424 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 IGLL5B9A064 214 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 CTSBP07858 339 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 PRIMA1Q86XR5 153 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 RPP25Q9BUL9 199 aaKnown RBP11.2□□□□□ -0.62
CHD1-212ENST00000614616 A0A0B4J2C4 111 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
CHD1-212ENST00000614616 PYGO2Q9BRQ0 406 aa11.2□□□□□ -0.62
CHD1-212ENST00000614616 A0A1B0GX51 115 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 K7EN84 100 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 Q6ZRM9 215 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 IGLV3-32A0A0A0MS00 114 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 DUSP14O95147 198 aaKnown RBP11.19□□□□□ -0.62
CHD1-212ENST00000614616 MYOD1P15172 320 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 PCP2Q8IVA1 136 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 ZNF837Q96EG3 531 aaPredicted RBP11.19□□□□□ -0.62
CHD1-212ENST00000614616 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 V9GYY9 64 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 APOBEC3AP31941 199 aaPredicted RBP11.19□□□□□ -0.62
CHD1-212ENST00000614616 Q6ZUT4 128 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 DKK2Q9UBU2 259 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 CRYGSP22914 178 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 C14orf178Q8N769 122 aaPredicted RBP11.19□□□□□ -0.62
CHD1-212ENST00000614616 ZNF747Q9BV97 191 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 PCOLCEQ15113 449 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 BRK1Q8WUW1 75 aa11.19□□□□□ -0.62
CHD1-212ENST00000614616 RBX1P62877 108 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 ZIC4Q8N9L1 334 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 ADAMTS20P59510 1910 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 RNF183Q96D59 192 aa11.18□□□□□ -0.62
CHD1-212ENST00000614616 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
CHD1-212ENST00000614616 TRBV25-1A0A075B6N4 114 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 TGFBR3LH3BV60 316 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 SUMO4Q6EEV6 95 aa11.17□□□□□ -0.62
CHD1-212ENST00000614616 DUX4L9Q6RFH8 374 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms