RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 SRSF8Q9BRL6 282 aaKnown RBP7.89□□□□□ -1.15
GGA3-221ENST00000614198 MTORP42345 2549 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 SETXQ7Z333 2677 aaKnown RBP7.89□□□□□ -1.15
GGA3-221ENST00000614198 A6NJY4 79 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 BUB1B-PAK6H3BSN5 160 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 CHEK1O14757 476 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 SAA1P0DJI8 122 aaPredicted RBP7.89□□□□□ -1.15
GGA3-221ENST00000614198 MLANAQ16655 118 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 RUSC1-AS1Q66K80 236 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 TMEM116Q8NCL8 245 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 OR10AG1Q8NH19 301 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 OR9G1Q8NH87 305 aa7.89□□□□□ -1.15
GGA3-221ENST00000614198 H3BTX0 84 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 CNIH1O95406 144 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 HIST1H1EP10412 219 aaKnown RBP7.88□□□□□ -1.15
GGA3-221ENST00000614198 VDAC2P45880 294 aaPredicted RBP7.88□□□□□ -1.15
GGA3-221ENST00000614198 BRD3OSQ6XYD6 125 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
GGA3-221ENST00000614198 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 NIPBLQ6KC79 2804 aaeCLIP7.88□□□□□ -1.15
GGA3-221ENST00000614198 GGTLC3B5MD39 225 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 FOXE3Q13461 319 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 ATP5L2Q7Z4Y8 100 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 VSTM2AQ8TAG5 236 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PGLYRP4Q96LB8 373 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 HARBI1Q96MB7 349 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 AMMECR1Q9Y4X0 333 aaPredicted RBP7.88□□□□□ -1.15
GGA3-221ENST00000614198 A0A0G2JLM5 398 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PSMB11A5LHX3 300 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PRR20EP86478 221 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PRR20CP86479 221 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PRR20DP86480 221 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PRR20BP86481 221 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 PRR20AP86496 221 aa7.88□□□□□ -1.15
GGA3-221ENST00000614198 TSSC4Q9Y5U2 329 aaPredicted RBP7.88□□□□□ -1.15
GGA3-221ENST00000614198 FAM90A9PA6NNJ1 464 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 PYYP10082 97 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 GNG5P63218 68 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 TMEM95Q3KNT9 176 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 TM4SF20Q53R12 229 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 TMEM189A5PLL7 270 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 TIMM23O14925 209 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 INSIG2Q9Y5U4 225 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 IGHV1-3A0A0C4DH29 117 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 A0A1W2PRE2 83 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 HSD52Q0P140 79 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 C10orf105Q8TEF2 133 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 ZNF503Q96F45 646 aa7.87□□□□□ -1.15
GGA3-221ENST00000614198 TEX48A0A1B0GUV7 120 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 COX7A2P2O60397 106 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 AVPP01185 164 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
GGA3-221ENST00000614198 HOXB4P17483 251 aaPredicted RBP7.86□□□□□ -1.15
GGA3-221ENST00000614198 RTL8BQ17RB0 113 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 PIP4P2Q8N4L2 257 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 OR8A1Q8NGG7 326 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 OR5AN1Q8NGI8 311 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 C19orf24Q9BVV8 132 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 GEMIN7Q9H840 131 aaKnown RBP7.86□□□□□ -1.15
GGA3-221ENST00000614198 A0A1W2PPM0 123 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 KIR3DS1Q14943 382 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 C8orf46Q8TAG6 207 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 HSPB8Q9UJY1 196 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 SPCS1Q9Y6A9 102 aa7.86□□□□□ -1.15
GGA3-221ENST00000614198 IGHV3-21A0A0B4J1V1 117 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 J3QKU1 62 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 IGLV2-23P01705 113 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 MRGPRG-AS1Q2M3A8 158 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 RPEQ96AT9 228 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 FLYWCH2Q96CP2 140 aaKnown RBP7.85□□□□□ -1.15
GGA3-221ENST00000614198 VWC2LB2RUY7 222 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 FGF6P10767 208 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 DPF1Q92782 380 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 FBXL15Q9H469 300 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 A0A1W2PPI3 338 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 CGB1A6NKQ9 187 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 C8orf88P0DMB2 117 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 ORM2P19652 201 aa7.85□□□□□ -1.15
GGA3-221ENST00000614198 CD300EQ496F6 205 aaPredicted RBP7.85□□□□□ -1.15
GGA3-221ENST00000614198 IGHV4-38-2P0DP08 117 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 GATA3P23771 443 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 HERV-K104P63124 156 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 HBBP68871 147 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 HES1Q14469 280 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 SIRPDQ9H106 197 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 RABAC1Q9UI14 185 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 F11RQ9Y624 299 aaKnown RBP7.84□□□□□ -1.15
GGA3-221ENST00000614198 TEX50A0A1B0GTY4 177 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
GGA3-221ENST00000614198 MTURNQ8N3F0 131 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 AJUBAQ96IF1 538 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 PIMREGQ9BSJ6 248 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 PAXXQ9BUH6 204 aa7.84□□□□□ -1.15
GGA3-221ENST00000614198 LOC389332A0A1B0GUA5 103 aa7.84□□□□□ -1.16
GGA3-221ENST00000614198 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.16
GGA3-221ENST00000614198 CIARTQ8N365 385 aaPredicted RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms