RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
CCL3-206ENST00000614051 ID1P41134 155 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 PSG3Q16557 428 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 ZNF506Q5JVG8 444 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 CCDC28AQ8IWP9 274 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 VAX2Q9UIW0 290 aa11.59□□□□□ -0.55
CCL3-206ENST00000614051 LINC00862A6NCI5 91 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 G3V4G9 280 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 CD81P60033 236 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 ZNF124Q15973 351 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 COMMD7Q86VX2 200 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 ARL2-SNX15V9GYD0 113 aa11.58□□□□□ -0.56
CCL3-206ENST00000614051 C9JQL5 133 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 F6UB75 175 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 CD7P09564 240 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 DEFB131AP59861 70 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
CCL3-206ENST00000614051 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
CCL3-206ENST00000614051 MAP6D1Q9H9H5 199 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 SCO2A0A1W2PP80 73 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 ZNF705DP0CH99 300 aaPredicted RBP11.57□□□□□ -0.56
CCL3-206ENST00000614051 ZNF705BP0CI00 300 aaPredicted RBP11.57□□□□□ -0.56
CCL3-206ENST00000614051 KRTAP10-11P60412 298 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 SAMD13Q5VXD3 122 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 RPUSD4Q96CM3 377 aaKnown RBP11.57□□□□□ -0.56
CCL3-206ENST00000614051 NKX6-2Q9C056 277 aaPredicted RBP11.57□□□□□ -0.56
CCL3-206ENST00000614051 MED9Q9NWA0 146 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 EPDR1Q9UM22 224 aa11.57□□□□□ -0.56
CCL3-206ENST00000614051 AGRNO00468 2067 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
CCL3-206ENST00000614051 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
CCL3-206ENST00000614051 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 C5orf17Q8NAS9 161 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 GPR61Q9BZJ8 451 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 PRELID1Q9Y255 219 aa11.56□□□□□ -0.56
CCL3-206ENST00000614051 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
CCL3-206ENST00000614051 TAGLN2P37802 199 aaKnown RBP11.55□□□□□ -0.56
CCL3-206ENST00000614051 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
CCL3-206ENST00000614051 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
CCL3-206ENST00000614051 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
CCL3-206ENST00000614051 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
CCL3-206ENST00000614051 PRR25Q96S07 402 aa11.55□□□□□ -0.56
CCL3-206ENST00000614051 RAB19A4D1S5 217 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 PEX7O00628 323 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 TCRAP04437 139 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 SRP19P09132 144 aaKnown RBP11.54□□□□□ -0.56
CCL3-206ENST00000614051 CSN1S1P47710 185 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 ERCC8Q13216 396 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 PEA15Q15121 130 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 SLC7A5P1Q8MH63 180 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
CCL3-206ENST00000614051 ASCL2Q99929 193 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 C19orf73Q9NVV2 129 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 CLEC5AQ9NY25 188 aa11.54□□□□□ -0.56
CCL3-206ENST00000614051 TRAV34A0A0B4J273 112 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 OR11H12B2RN74 326 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 CEBPGP53567 150 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 EGFEM1PQ0D2K5 195 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 VGLL1Q99990 258 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 TXNDC17Q9BRA2 123 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 DERL1Q9BUN8 251 aa11.53□□□□□ -0.56
CCL3-206ENST00000614051 TRAV8-1A0A0A6YYK1 113 aa11.52□□□□□ -0.56
CCL3-206ENST00000614051 PDE6DO43924 150 aa11.52□□□□□ -0.56
CCL3-206ENST00000614051 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.56
CCL3-206ENST00000614051 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.56
CCL3-206ENST00000614051 OR8A1Q8NGG7 326 aa11.52□□□□□ -0.56
CCL3-206ENST00000614051 ATG101Q9BSB4 218 aa11.52□□□□□ -0.56
CCL3-206ENST00000614051 F6UZH7 168 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
CCL3-206ENST00000614051 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 HIST1H2BAQ96A08 127 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 C11orf52Q96A22 123 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 CITED4Q96RK1 184 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 SAV1Q9H4B6 383 aaPredicted RBP11.51□□□□□ -0.57
CCL3-206ENST00000614051 A0A0J9YX75 114 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 IGKV3-20P01619 116 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 AKR1C3P42330 323 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 FOXI2Q6ZQN5 318 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 Q8N1Y9 231 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 DEFB125Q8N687 156 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 AGPAT4-IT1Q9H0P7 198 aa11.51□□□□□ -0.57
CCL3-206ENST00000614051 NOTCH1P46531 2555 aa11.5□□□□□ -0.57
CCL3-206ENST00000614051 IGLV2-11P01706 119 aa11.5□□□□□ -0.57
CCL3-206ENST00000614051 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
CCL3-206ENST00000614051 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms