RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 ANXA2RQ3ZCQ2 193 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 ZCCHC24Q8N2G6 241 aaKnown RBP5.55□□□□□ -1.52
CLCN3-211ENST00000613795 FGFBP3Q8TAT2 258 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 SBF1O95248 1867 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 TRAV3A0A0B4J244 114 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 TMEM213A2RRL7 107 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 KNCNA6PVL3 124 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 ZNF672Q499Z4 452 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-211ENST00000613795 RNF166Q96A37 237 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-211ENST00000613795 RNF183Q96D59 192 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 PIKFYVEQ9Y2I7 2098 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 TRBV25-1A0A075B6N4 114 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 TRGV2A0A075B6R0 118 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3OR16-13A0A075B7E8 117 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3-74A0A0B4J1X5 117 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3-35A0A0C4DH35 117 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 RNF144BQ7Z419 303 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 SHANK2-AS3Q9BTD1 123 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 DOCK4Q8N1I0 1966 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 PAX4O43316 350 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 Q6ZS92 163 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 Q8TCH9 128 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 A0A0B4J2C4 111 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV1-3A0A0C4DH29 117 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 PINLYPA6NC86 204 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 ETV2O00321 342 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-211ENST00000613795 MORN5Q5VZ52 161 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 VMO1Q7Z5L0 202 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 THSD7BQ9C0I4 1608 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 ADARB2-AS1A8MUL3 147 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 MALP21145 153 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 Q71RC1 249 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-211ENST00000613795 TMEM14CQ9P0S9 112 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 S4R3C0 116 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 SPTBP11277 2137 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 TIMM23O14925 209 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 ZNF876PQ49A33 203 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 TMEM200BQ69YZ2 307 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 PCP2Q8IVA1 136 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 LINC01356Q8N9X3 169 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 TMEM243Q9BU79 118 aa5.54□□□□□ -1.52
CLCN3-211ENST00000613795 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 CCL3L1P16619 93 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3OR16-10A0A075B7F0 116 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.53□□□□□ -1.52
CLCN3-211ENST00000613795 Q6ZUT4 128 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 A0A0U1RRA0 63 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 IL17RELQ6ZVW7 336 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 TMEM14BQ9NUH8 114 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 PLA2G2EQ9NZK7 142 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 TP53TG1Q9Y2A0 90 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 MSRB2Q9Y3D2 182 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3-49A0A0A0MS15 119 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 IGKV1-6A0A0C4DH72 117 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 B3GALT5-AS1P59052 145 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 RPL32P62910 135 aaKnown RBP5.53□□□□□ -1.52
CLCN3-211ENST00000613795 IGFL3Q6UXB1 125 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 TRPT1Q86TN4 253 aaKnown RBP5.53□□□□□ -1.52
CLCN3-211ENST00000613795 GAFA1Q96PS6 74 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 C20orf78Q9BR46 151 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 A0A1W2PRX2 142 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 J3QLI3 93 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 IGKV3-20P01619 116 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 NDUFV3P56181 108 aaKnown RBP5.53□□□□□ -1.52
CLCN3-211ENST00000613795 JPT2Q9H910 190 aa5.53□□□□□ -1.52
CLCN3-211ENST00000613795 BUB1B-PAK6H3BSN5 160 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 J3QQQ9 107 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 NDUFB8O95169 186 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 LTAP01374 205 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 FAM201AQ5SY85 155 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 RNF114Q9Y508 228 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 TRAV13-2A0A0B4J235 113 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 C14orf178Q8N769 122 aaPredicted RBP5.52□□□□□ -1.53
CLCN3-211ENST00000613795 DPH3Q96FX2 82 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 PSPNO60542 156 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 GATA4P43694 442 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 SMIM2Q9BVW6 85 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 IGKV1-39P01597 117 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 IGKV1D-39P04432 117 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 C5orf64Q2M2E5 130 aa5.52□□□□□ -1.53
CLCN3-211ENST00000613795 ZNF474Q6S9Z5 364 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-211ENST00000613795 TRGV4A0A0C4DH28 118 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 EFNA2O43921 213 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 CD24P25063 80 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 FXYD2P54710 66 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 ZNF625Q96I27 306 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-211ENST00000613795 TRBV19A0A075B6N1 114 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 WIPF3A6NGB9 483 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 C22orf46C9J442 243 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 H3BT86 120 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 PRR20EP86478 221 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 PRR20CP86479 221 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 PRR20DP86480 221 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 PRR20BP86481 221 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 PRR20AP86496 221 aa5.51□□□□□ -1.53
CLCN3-211ENST00000613795 CD177Q8N6Q3 437 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms