RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 A0A0J9YWU9 116 aa16.07■□□□□ 0.16
CBWD3-207ENST00000611426 RPL35AP18077 110 aaKnown RBP16.07■□□□□ 0.16
CBWD3-207ENST00000611426 LYZP61626 148 aa16.07■□□□□ 0.16
CBWD3-207ENST00000611426 KIR2DL5AQ8N109 375 aa16.07■□□□□ 0.16
CBWD3-207ENST00000611426 KIR2DL5BQ8NHK3 375 aa16.07■□□□□ 0.16
CBWD3-207ENST00000611426 SHANK2-AS3Q9BTD1 123 aa16.07■□□□□ 0.16
CBWD3-207ENST00000611426 H3BRN7 92 aa16.06■□□□□ 0.16
CBWD3-207ENST00000611426 PAGE4O60829 102 aa16.06■□□□□ 0.16
CBWD3-207ENST00000611426 UHRF2Q96PU4 802 aa16.06■□□□□ 0.16
CBWD3-207ENST00000611426 SLC25A39Q9BZJ4 359 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-207ENST00000611426 TMEM14CQ9P0S9 112 aa16.06■□□□□ 0.16
CBWD3-207ENST00000611426 RNF24Q9Y225 148 aa16.06■□□□□ 0.16
CBWD3-207ENST00000611426 CXorf65A6NEN9 183 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 IL4P05112 153 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 TFPI2P48307 235 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 CMC4P56277 68 aaPredicted RBP16.05■□□□□ 0.16
CBWD3-207ENST00000611426 SOHLH1Q5JUK2 328 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 APRG1Q8IVJ8 170 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 CCDC28AQ8IWP9 274 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 SVBPQ8N300 66 aa16.05■□□□□ 0.16
CBWD3-207ENST00000611426 IGKV3-7A0A075B6H7 116 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 A0A1W2PRE2 83 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 FAM74A7A6NL05 159 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 PDE6DO43924 150 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 OR7C2O60412 319 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 APOC3P02656 99 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 S100A7P31151 101 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 FAM90A2PQ658T7 463 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 IQCF2Q8IXL9 164 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 CYB561D1Q8N8Q1 229 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 RNF183Q96D59 192 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 PAXXQ9BUH6 204 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 MAP6D1Q9H9H5 199 aa16.04■□□□□ 0.16
CBWD3-207ENST00000611426 BIRC6Q9NR09 4857 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 IGHV3OR16-13A0A075B7E8 117 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 IGHV3-74A0A0B4J1X5 117 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 TRAV5A0A0B4J249 113 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 C11orf94C9JXX5 98 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 F6UZH7 168 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 USF2Q15853 346 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-207ENST00000611426 FXYD5Q96DB9 178 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 NKX6-2Q9C056 277 aaPredicted RBP16.03■□□□□ 0.16
CBWD3-207ENST00000611426 OR51M1Q9H341 326 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 ZFAND3Q9H8U3 227 aa16.03■□□□□ 0.16
CBWD3-207ENST00000611426 UBE2L3P68036 154 aaKnown RBP16.02■□□□□ 0.16
CBWD3-207ENST00000611426 TOMM20LQ6UXN7 152 aa16.02■□□□□ 0.16
CBWD3-207ENST00000611426 GBGT1Q8N5D6 347 aa16.02■□□□□ 0.16
CBWD3-207ENST00000611426 YTHDF2Q9Y5A9 579 aaKnown RBP16.02■□□□□ 0.16
CBWD3-207ENST00000611426 PUS1Q9Y606 427 aaKnown RBP eCLIP16.02■□□□□ 0.16
CBWD3-207ENST00000611426 PAFAH1B2P68402 229 aa16.01■□□□□ 0.15
CBWD3-207ENST00000611426 ZNF124Q15973 351 aa16.01■□□□□ 0.15
CBWD3-207ENST00000611426 C11orf52Q96A22 123 aa16.01■□□□□ 0.15
CBWD3-207ENST00000611426 TCEAL7Q9BRU2 100 aa16.01■□□□□ 0.15
CBWD3-207ENST00000611426 FAM74A3Q4VXF1 159 aa16■□□□□ 0.15
CBWD3-207ENST00000611426 TCF24Q7RTU0 167 aa16■□□□□ 0.15
CBWD3-207ENST00000611426 NUPR2A6NF83 97 aa16■□□□□ 0.15
CBWD3-207ENST00000611426 SNAPINO95295 136 aa16■□□□□ 0.15
CBWD3-207ENST00000611426 CSTL1Q9H114 145 aa16■□□□□ 0.15
CBWD3-207ENST00000611426 ZNF98A6NK75 572 aa15.99■□□□□ 0.15
CBWD3-207ENST00000611426 MRPS12O15235 138 aaKnown RBP15.99■□□□□ 0.15
CBWD3-207ENST00000611426 APOHP02749 345 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-207ENST00000611426 PYYP10082 97 aa15.99■□□□□ 0.15
CBWD3-207ENST00000611426 ATP5G3P48201 142 aa15.99■□□□□ 0.15
CBWD3-207ENST00000611426 UBE2G2P60604 165 aa15.99■□□□□ 0.15
CBWD3-207ENST00000611426 CST9LP1Q5W188 147 aa15.99■□□□□ 0.15
CBWD3-207ENST00000611426 OR10J4P0C629 311 aa15.98■□□□□ 0.15
CBWD3-207ENST00000611426 HIST1H1EP10412 219 aaKnown RBP15.98■□□□□ 0.15
CBWD3-207ENST00000611426 ATF4P18848 351 aaPredicted RBP15.98■□□□□ 0.15
CBWD3-207ENST00000611426 CEMP1Q6PRD7 247 aaPredicted RBP15.98■□□□□ 0.15
CBWD3-207ENST00000611426 BPIFA4PQ86YQ2 179 aa15.98■□□□□ 0.15
CBWD3-207ENST00000611426 LINC00476Q8WZB0 136 aa15.98■□□□□ 0.15
CBWD3-207ENST00000611426 RABAC1Q9UI14 185 aa15.98■□□□□ 0.15
CBWD3-207ENST00000611426 IGHV3-66A0A0C4DH42 116 aa15.97■□□□□ 0.15
CBWD3-207ENST00000611426 DNASE2O00115 360 aaPredicted RBP15.97■□□□□ 0.15
CBWD3-207ENST00000611426 LY6G6CO95867 125 aa15.97■□□□□ 0.15
CBWD3-207ENST00000611426 RPL11P62913 178 aaKnown RBP15.97■□□□□ 0.15
CBWD3-207ENST00000611426 MS4A6AQ9H2W1 248 aa15.97■□□□□ 0.15
CBWD3-207ENST00000611426 U3KQE9 123 aa15.97■□□□□ 0.15
CBWD3-207ENST00000611426 GGTLC3B5MD39 225 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 NBEAP1P0C6P0 100 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 IGLC2P0DOY2 106 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 NPPCP23582 126 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 C1orf194Q5T5A4 169 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 CLRN3Q8NCR9 226 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 NIPSNAP3BQ9BS92 247 aa15.96■□□□□ 0.15
CBWD3-207ENST00000611426 H3BQ15 152 aa15.95■□□□□ 0.14
CBWD3-207ENST00000611426 CRYBB3P26998 211 aa15.95■□□□□ 0.14
CBWD3-207ENST00000611426 PNRC1Q12796 327 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-207ENST00000611426 KLK5Q9Y337 293 aaPredicted RBP15.95■□□□□ 0.14
CBWD3-207ENST00000611426 RPL7P18124 248 aaKnown RBP15.94■□□□□ 0.14
CBWD3-207ENST00000611426 PDE6HQ13956 83 aa15.94■□□□□ 0.14
CBWD3-207ENST00000611426 LEMD1Q68G75 181 aa15.94■□□□□ 0.14
CBWD3-207ENST00000611426 ATRAIDQ6UW56 229 aa15.94■□□□□ 0.14
CBWD3-207ENST00000611426 RPUSD4Q96CM3 377 aaKnown RBP15.94■□□□□ 0.14
CBWD3-207ENST00000611426 GPR82Q96P67 336 aa15.94■□□□□ 0.14
CBWD3-207ENST00000611426 PARLQ9H300 379 aa15.94■□□□□ 0.14
CBWD3-207ENST00000611426 A0A1W2PS18 150 aa15.93■□□□□ 0.14
CBWD3-207ENST00000611426 RHEBQ15382 184 aa15.93■□□□□ 0.14
CBWD3-207ENST00000611426 LYPD1Q8N2G4 141 aa15.93■□□□□ 0.14
CBWD3-207ENST00000611426 TVP23CQ96ET8 276 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms