RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 IGHG4P01861 327 aa21.67■■□□□ 1.06
CSPG5-205ENST00000610462 TRGV3P03979 118 aa21.67■■□□□ 1.06
CSPG5-205ENST00000610462 Q6ZWC4 215 aa21.67■■□□□ 1.06
CSPG5-205ENST00000610462 M0QZK8 103 aa21.66■■□□□ 1.06
CSPG5-205ENST00000610462 SRSF1Q07955 248 aaKnown RBP eCLIP21.66■■□□□ 1.06
CSPG5-205ENST00000610462 CT45A10P0DMU9 189 aa21.65■■□□□ 1.06
CSPG5-205ENST00000610462 KLF5Q13887 457 aaPredicted RBP21.65■■□□□ 1.06
CSPG5-205ENST00000610462 C1orf194Q5T5A4 169 aa21.65■■□□□ 1.06
CSPG5-205ENST00000610462 ALKBH7Q9BT30 221 aaPredicted RBP21.65■■□□□ 1.06
CSPG5-205ENST00000610462 GPX1P07203 203 aa21.65■■□□□ 1.06
CSPG5-205ENST00000610462 COX8CQ7Z4L0 72 aa21.65■■□□□ 1.06
CSPG5-205ENST00000610462 METTL26Q96S19 204 aa21.65■■□□□ 1.06
CSPG5-205ENST00000610462 SPG11Q96JI7 2443 aa21.64■■□□□ 1.06
CSPG5-205ENST00000610462 A0A1W2PS18 150 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 SAPCD1Q5SSQ6 148 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 IGFL4Q6B9Z1 124 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 SIGLECL1Q8N7X8 197 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 HAX1O00165 279 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 BRI3O95415 125 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 HLA-DMBP28068 263 aa21.64■■□□□ 1.05
CSPG5-205ENST00000610462 VPS13CQ709C8 3753 aa21.63■■□□□ 1.05
CSPG5-205ENST00000610462 APOHP02749 345 aaPredicted RBP21.63■■□□□ 1.05
CSPG5-205ENST00000610462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa21.63■■□□□ 1.05
CSPG5-205ENST00000610462 PPIFP30405 207 aaKnown RBP21.62■■□□□ 1.05
CSPG5-205ENST00000610462 LINC01356Q8N9X3 169 aa21.62■■□□□ 1.05
CSPG5-205ENST00000610462 U3KQE9 123 aa21.62■■□□□ 1.05
CSPG5-205ENST00000610462 H3BUA1 57 aa21.62■■□□□ 1.05
CSPG5-205ENST00000610462 LCN12Q6JVE5 192 aa21.62■■□□□ 1.05
CSPG5-205ENST00000610462 PRR25Q96S07 402 aa21.62■■□□□ 1.05
CSPG5-205ENST00000610462 A0A096LNT2 108 aa21.61■■□□□ 1.05
CSPG5-205ENST00000610462 IGHV3-66A0A0C4DH42 116 aa21.61■■□□□ 1.05
CSPG5-205ENST00000610462 ZNF705FA8MVS1 300 aaPredicted RBP21.61■■□□□ 1.05
CSPG5-205ENST00000610462 ZNF705DP0CH99 300 aaPredicted RBP21.61■■□□□ 1.05
CSPG5-205ENST00000610462 ZNF705BP0CI00 300 aaPredicted RBP21.61■■□□□ 1.05
CSPG5-205ENST00000610462 SLC50A1Q9BRV3 221 aa21.61■■□□□ 1.05
CSPG5-205ENST00000610462 VGLL1Q99990 258 aa21.6■■□□□ 1.05
CSPG5-205ENST00000610462 MYO18BQ8IUG5 2567 aa21.6■■□□□ 1.05
CSPG5-205ENST00000610462 KIR2DL5BA0A0G2JN68 375 aa21.6■■□□□ 1.05
CSPG5-205ENST00000610462 KIR2DL5BA0A0G2JPC4 375 aa21.6■■□□□ 1.05
CSPG5-205ENST00000610462 AMTP48728 403 aa21.6■■□□□ 1.05
CSPG5-205ENST00000610462 KIR2DL5AQ8N109 375 aa21.6■■□□□ 1.05
CSPG5-205ENST00000610462 A1L4Q6 167 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 ZNF324O75467 553 aaPredicted RBP21.59■■□□□ 1.05
CSPG5-205ENST00000610462 BLCAPP62952 87 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 LBHQ53QV2 105 aaPredicted RBP21.59■■□□□ 1.05
CSPG5-205ENST00000610462 A0A1B0GUT8 65 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 ZNF207O43670 478 aaKnown RBP21.59■■□□□ 1.05
CSPG5-205ENST00000610462 SH2D1AO60880 128 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 CD33P20138 364 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 ARL3P36405 182 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 FAM162BQ5T6X4 162 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 Q6AWC8 147 aa21.59■■□□□ 1.05
CSPG5-205ENST00000610462 IGHV3OR16-13A0A075B7E8 117 aa21.58■■□□□ 1.05
CSPG5-205ENST00000610462 IGHV3-74A0A0B4J1X5 117 aa21.58■■□□□ 1.05
CSPG5-205ENST00000610462 A0A1B0GV90 55 aa21.58■■□□□ 1.05
CSPG5-205ENST00000610462 USMG5Q96IX5 58 aa21.58■■□□□ 1.05
CSPG5-205ENST00000610462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.58■■□□□ 1.04
CSPG5-205ENST00000610462 PMCHP20382 165 aa21.57■■□□□ 1.04
CSPG5-205ENST00000610462 RIGQ13278 110 aa21.57■■□□□ 1.04
CSPG5-205ENST00000610462 C2orf88Q9BSF0 95 aa21.57■■□□□ 1.04
CSPG5-205ENST00000610462 PRR31Q5SQ13 230 aa21.57■■□□□ 1.04
CSPG5-205ENST00000610462 NRN1Q9NPD7 142 aa21.57■■□□□ 1.04
CSPG5-205ENST00000610462 IGHV3-49A0A0A0MS15 119 aa21.56■■□□□ 1.04
CSPG5-205ENST00000610462 Q8TAT8 98 aa21.56■■□□□ 1.04
CSPG5-205ENST00000610462 UTP20O75691 2785 aaKnown RBP21.56■■□□□ 1.04
CSPG5-205ENST00000610462 TMEM189A5PLL7 270 aa21.56■■□□□ 1.04
CSPG5-205ENST00000610462 ARMS2P0C7Q2 107 aa21.56■■□□□ 1.04
CSPG5-205ENST00000610462 Q6ZS46 218 aa21.56■■□□□ 1.04
CSPG5-205ENST00000610462 RBAKDNA6NC62 111 aa21.55■■□□□ 1.04
CSPG5-205ENST00000610462 J3QLI3 93 aa21.55■■□□□ 1.04
CSPG5-205ENST00000610462 TEX43Q6ZNM6 134 aa21.55■■□□□ 1.04
CSPG5-205ENST00000610462 GATD1Q8NB37 220 aa21.55■■□□□ 1.04
CSPG5-205ENST00000610462 ZNF462Q96JM2 2506 aa21.55■■□□□ 1.04
CSPG5-205ENST00000610462 A0A1B0GW15 77 aa21.54■■□□□ 1.04
CSPG5-205ENST00000610462 RNF182Q8N6D2 247 aa21.54■■□□□ 1.04
CSPG5-205ENST00000610462 CELSR1Q9NYQ6 3014 aa21.54■■□□□ 1.04
CSPG5-205ENST00000610462 LOC102724200A0A096LPH7 203 aaPredicted RBP21.54■■□□□ 1.04
CSPG5-205ENST00000610462 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.54■■□□□ 1.04
CSPG5-205ENST00000610462 NDFIP1Q9BT67 221 aa21.54■■□□□ 1.04
CSPG5-205ENST00000610462 PRAC2D3DTV9 90 aa21.53■■□□□ 1.04
CSPG5-205ENST00000610462 TRBV12-3P01733 135 aa21.53■■□□□ 1.04
CSPG5-205ENST00000610462 RNF114Q9Y508 228 aa21.53■■□□□ 1.04
CSPG5-205ENST00000610462 NDUFA4O00483 81 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 BMI1P35226 326 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 NIT1Q86X76 327 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 FAM19A2Q8N3H0 131 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 ZFHX3Q15911 3703 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 TRAV8-2A0A0B4J237 113 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 PF4V1P10720 104 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 MRPL53Q96EL3 112 aaKnown RBP21.52■■□□□ 1.04
CSPG5-205ENST00000610462 KLK15Q9H2R5 256 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 ZFYVE26Q68DK2 2539 aa21.52■■□□□ 1.04
CSPG5-205ENST00000610462 CRYBG3Q68DQ2 2970 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 IGLV1-40P01703 118 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 ZNF80P51504 273 aaPredicted RBP21.51■■□□□ 1.03
CSPG5-205ENST00000610462 ERCC8Q13216 396 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 DEFB112Q30KQ8 113 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 C8orf86Q6ZUL3 223 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 BORCS7Q96B45 105 aa21.51■■□□□ 1.03
CSPG5-205ENST00000610462 HSBP1O75506 76 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms