RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 LINC00311Q8N616 119 aa7.82□□□□□ -1.16
CTCFL-222ENST00000609232 KCNIP2Q9NS61 270 aa7.82□□□□□ -1.16
CTCFL-222ENST00000609232 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
CTCFL-222ENST00000609232 IGHV4-30-2A0A087WSY4 118 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 LOC389332A0A1B0GUA5 103 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 FAM90A9PA6NNJ1 464 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 HSBP1O75506 76 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 TSPOP30536 169 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 SRIP30626 198 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 PMCHL2Q9BQD1 86 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 IL36BQ9NZH7 164 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 RABAC1Q9UI14 185 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 TP53TG3Q9ULZ0 132 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 SIGLEC9Q9Y336 463 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 GAGE12BA1L429 117 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 IGHV4-39P01824 125 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 USF1P22415 310 aaPredicted RBP7.81□□□□□ -1.16
CTCFL-222ENST00000609232 RAB9AP51151 201 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 BLCAPP62952 87 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 PMCHL1Q16048 86 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 CENPWQ5EE01 88 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 TCF24Q7RTU0 167 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 H3BUX3 64 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 IGHV4-38-2P0DP08 117 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 TMEM14BQ9NUH8 114 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 RNF114Q9Y508 228 aa7.81□□□□□ -1.16
CTCFL-222ENST00000609232 ZNF138P52744 262 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 OR52E5Q8NH55 327 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 MUC4Q99102 2169 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 A0A1B0GV72 72 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 CORTO00230 105 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 VDAC2P45880 294 aaPredicted RBP7.8□□□□□ -1.16
CTCFL-222ENST00000609232 MFAP2P55001 183 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 THYN1Q9P016 225 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 SS18L2Q9UHA2 77 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 ARL2-SNX15V9GYD0 113 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 IGLV1-47P01700 117 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 PPBPP02775 128 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 LGALS7P47929 136 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 C10orf99Q6UWK7 81 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 RNF182Q8N6D2 247 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 Q8N7P7 452 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 TMEM75Q8N9X5 138 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 KCNS1Q96KK3 526 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
CTCFL-222ENST00000609232 K7EP13 123 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 ZNF324O75467 553 aaPredicted RBP7.79□□□□□ -1.16
CTCFL-222ENST00000609232 PRTN3P24158 256 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 LINC00310P59036 64 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 HERV-K104P63124 156 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 PRCDQ00LT1 54 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 CIARTQ8N365 385 aaPredicted RBP7.79□□□□□ -1.16
CTCFL-222ENST00000609232 ZNF331Q9NQX6 463 aaPredicted RBP7.79□□□□□ -1.16
CTCFL-222ENST00000609232 WDR83OSQ9Y284 106 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 ISLRO14498 428 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 Q0VG73 95 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 RNASEKQ6P5S7 137 aaKnown RBP7.79□□□□□ -1.16
CTCFL-222ENST00000609232 C8orf31Q8N9H6 132 aa7.79□□□□□ -1.16
CTCFL-222ENST00000609232 TRBV20OR9-2A0A075B6H5 130 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 IGHV3OR16-12A0A075B7B8 117 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 M0R1W7 72 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 M0R2Z0 102 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 FSTL3O95633 263 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 RNASE2P10153 161 aaKnown RBP7.78□□□□□ -1.16
CTCFL-222ENST00000609232 FAM71F2Q6NXP2 309 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 RCHY1Q96PM5 261 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 OTOGQ6ZRI0 2925 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 A0A1W2PS18 150 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 Q6ZS46 218 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 LY6G5BQ8NDX9 201 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 C8orf46Q8TAG6 207 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 TMEM167AQ8TBQ9 72 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 ZNF257Q9Y2Q1 563 aa7.78□□□□□ -1.16
CTCFL-222ENST00000609232 SNAI2O43623 268 aa7.77□□□□□ -1.16
CTCFL-222ENST00000609232 ORM1P02763 201 aa7.77□□□□□ -1.16
CTCFL-222ENST00000609232 C15orf32Q32M92 178 aa7.77□□□□□ -1.16
CTCFL-222ENST00000609232 IGHV2-70DA0A0C4DH43 119 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 CXorf1O96002 111 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 MT-ND6P03923 174 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 NBEAP1P0C6P0 100 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 CKS1BP61024 79 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 TRAV30A0A087WSZ9 112 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 IGKV2-40A0A087WW87 121 aaPredicted RBP7.77□□□□□ -1.17
CTCFL-222ENST00000609232 IGKV2D-40P01614 121 aaPredicted RBP7.77□□□□□ -1.17
CTCFL-222ENST00000609232 APCSP02743 223 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 CD69Q07108 199 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 DEFB136Q30KP8 78 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
CTCFL-222ENST00000609232 MRPS16Q9Y3D3 137 aaKnown RBP7.77□□□□□ -1.17
CTCFL-222ENST00000609232 TRBV9A0A0B4J1U6 114 aa7.76□□□□□ -1.17
CTCFL-222ENST00000609232 NUDT3O95989 172 aa7.76□□□□□ -1.17
CTCFL-222ENST00000609232 AZU1P20160 251 aa7.76□□□□□ -1.17
CTCFL-222ENST00000609232 CTRLP40313 264 aa7.76□□□□□ -1.17
CTCFL-222ENST00000609232 TAS2R45P59539 299 aa7.76□□□□□ -1.17
CTCFL-222ENST00000609232 RHOGP84095 191 aa7.76□□□□□ -1.17
CTCFL-222ENST00000609232 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms