RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 GSN-AS1Q9NRJ2 163 aa11.83□□□□□ -0.52
CHMP4A-211ENST00000609024 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
CHMP4A-211ENST00000609024 MSRB1Q9NZV6 116 aa11.83□□□□□ -0.52
CHMP4A-211ENST00000609024 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.52
CHMP4A-211ENST00000609024 MYCBP2O75592 4640 aa11.83□□□□□ -0.52
CHMP4A-211ENST00000609024 ZNF324O75467 553 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-211ENST00000609024 EVI2AP22794 236 aa11.82□□□□□ -0.52
CHMP4A-211ENST00000609024 SLAQ13239 276 aa11.82□□□□□ -0.52
CHMP4A-211ENST00000609024 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
CHMP4A-211ENST00000609024 IGLV5-52A0A0A0MRZ9 124 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 H3BTX0 84 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 K7EP13 123 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 PSCAO43653 123 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 COX7A2P2O60397 106 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 TEPPQ6URK8 271 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 ZNF431Q8TF32 576 aaPredicted RBP11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 ODF3Q96PU9 254 aa11.81□□□□□ -0.52
CHMP4A-211ENST00000609024 SLC25A5P05141 298 aaKnown RBP11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 CT45A10P0DMU9 189 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 HAMPP81172 84 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 ZNF546Q86UE3 836 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 LINC00467Q9BRT7 94 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 CCDC59Q9P031 241 aaKnown RBP11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 PRO0255Q9UI72 69 aa11.8□□□□□ -0.52
CHMP4A-211ENST00000609024 FAT1Q14517 4588 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 PATE2Q6UY27 113 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 EIF4E3Q8N5X7 224 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 TMEM70Q9BUB7 260 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 HHLA3Q9XRX5 114 aa11.79□□□□□ -0.52
CHMP4A-211ENST00000609024 C7orf71A4D174 169 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 SLC17A3O00476 420 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 SSSCA1O60232 199 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 SFT2D2O95562 160 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 AP3S2P59780 193 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
CHMP4A-211ENST00000609024 PRAF2O60831 178 aa11.77□□□□□ -0.53
CHMP4A-211ENST00000609024 SRIP30626 198 aa11.77□□□□□ -0.53
CHMP4A-211ENST00000609024 GUK1Q16774 197 aa11.77□□□□□ -0.53
CHMP4A-211ENST00000609024 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.53
CHMP4A-211ENST00000609024 C8orf49Q96NF6 230 aa11.77□□□□□ -0.53
CHMP4A-211ENST00000609024 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 FABP12A6NFH5 140 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 FNDC10F2Z333 226 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 K7EPK0 472 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 RGS13O14921 159 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 SPINK4O60575 86 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 MPDU1O75352 247 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 PLA2G1BP04054 148 aaKnown RBP11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 METTL15P1P0C7V9 234 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 PPP1R1AQ13522 171 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 ANXA2RQ3ZCQ2 193 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 TOMM5Q8N4H5 51 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 C11orf72Q8NBR9 251 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 NTN5Q8WTR8 489 aaPredicted RBP11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 ARPC5LQ9BPX5 153 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 SLC25A21Q9BQT8 299 aaPredicted RBP11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 KLF12Q9Y4X4 402 aa11.76□□□□□ -0.53
CHMP4A-211ENST00000609024 TRGV4A0A0C4DH28 118 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 E5RGE8 158 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 AGPAT2O15120 278 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 RNASE4P34096 147 aaKnown RBP11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 CRYBA4P53673 196 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 TCL1AP56279 114 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 ID3Q02535 119 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 Q6ZRG5 221 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 SMIM8Q96KF7 97 aa11.75□□□□□ -0.53
CHMP4A-211ENST00000609024 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 GPX1P07203 203 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 CRYGDP07320 174 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 IGLC2P0DOY2 106 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 RAB31Q13636 194 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 WFDC10BQ8IUB3 73 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 VGLL1Q99990 258 aa11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 MRPL16Q9NX20 251 aaKnown RBP11.74□□□□□ -0.53
CHMP4A-211ENST00000609024 H3BQ15 152 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 CCNKO75909 580 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 ZNF415Q09FC8 603 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 OPCMLQ14982 345 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 SPCS2Q15005 226 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 IBA57Q5T440 356 aaKnown RBP11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
CHMP4A-211ENST00000609024 CD300CQ08708 224 aa11.72□□□□□ -0.53
CHMP4A-211ENST00000609024 ERCC8Q13216 396 aa11.72□□□□□ -0.53
CHMP4A-211ENST00000609024 C4orf46Q504U0 113 aa11.72□□□□□ -0.53
CHMP4A-211ENST00000609024 SERTAD4-AS1Q5TG53 156 aa11.72□□□□□ -0.53
CHMP4A-211ENST00000609024 TMEM14EPQ6UXP3 125 aa11.72□□□□□ -0.53
CHMP4A-211ENST00000609024 TMEM37Q8WXS4 190 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms