RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SLC25A15Q9Y619 301 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 NCOR1O75376 2440 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 PRRG2O14669 202 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 SH2D1AO60880 128 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 IGHV1-46P01743 117 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 EVI2AP22794 236 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM30BQ3MIR4 351 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM178AQ8NBL3 297 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 RASL11BQ9BPW5 248 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 GPR179Q6PRD1 2367 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 C12orf74Q32Q52 190 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 MRAP2Q96G30 205 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM160Q9NX00 188 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM8BA6NDV4 472 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 PIFOQ8TCI5 191 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 SCNM1Q9BWG6 230 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 GATA4P43694 442 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 CCL8P80075 99 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 ZMAT4Q9H898 229 aa9.79□□□□□ -0.84
CDCA3-212ENST00000604599 MAP1BP46821 2468 aaKnown RBP9.78□□□□□ -0.84
CDCA3-212ENST00000604599 TRAV40A0A0B4J280 105 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 KLF17Q5JT82 389 aaPredicted RBP9.78□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM200BQ69YZ2 307 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 DKK4Q9UBT3 224 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 FCN3O75636 299 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 GLRXP35754 106 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 PRB3Q04118 309 aaPredicted RBP9.78□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM164Q5U3C3 297 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 FAM169BQ8N8A8 192 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 FER1L6-AS2Q96M78 137 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 PROCRQ9UNN8 238 aa9.78□□□□□ -0.84
CDCA3-212ENST00000604599 DPM2O94777 84 aa9.77□□□□□ -0.84
CDCA3-212ENST00000604599 APOMO95445 188 aa9.77□□□□□ -0.84
CDCA3-212ENST00000604599 IGKV1-17P01599 117 aa9.77□□□□□ -0.84
CDCA3-212ENST00000604599 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.84
CDCA3-212ENST00000604599 IGKV2-40A0A087WW87 121 aaPredicted RBP9.77□□□□□ -0.85
CDCA3-212ENST00000604599 IGKV2D-40P01614 121 aaPredicted RBP9.77□□□□□ -0.85
CDCA3-212ENST00000604599 EGR2P11161 476 aaPredicted RBP9.77□□□□□ -0.85
CDCA3-212ENST00000604599 DLX1P56177 255 aa9.77□□□□□ -0.85
CDCA3-212ENST00000604599 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
CDCA3-212ENST00000604599 Q8TAT8 98 aa9.77□□□□□ -0.85
CDCA3-212ENST00000604599 ZNF502Q8TBZ5 544 aa9.77□□□□□ -0.85
CDCA3-212ENST00000604599 TMEM158Q8WZ71 300 aa9.77□□□□□ -0.85
CDCA3-212ENST00000604599 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.85
CDCA3-212ENST00000604599 IGLV3-9A0A075B6K5 115 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 MRPL16Q9NX20 251 aaKnown RBP9.76□□□□□ -0.85
CDCA3-212ENST00000604599 CEP250Q9BV73 2442 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 TACC2O95359 2948 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 SHISA9B4DS77 424 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 RRN3P1Q2M238 152 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 PVRIGQ6DKI7 326 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 TTC9CQ8N5M4 171 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 MRPL35Q9NZE8 188 aaKnown RBP9.76□□□□□ -0.85
CDCA3-212ENST00000604599 S4R3C0 116 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 IL4P05112 153 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 WT1P19544 449 aaPredicted RBP9.76□□□□□ -0.85
CDCA3-212ENST00000604599 MC5RP33032 325 aa9.76□□□□□ -0.85
CDCA3-212ENST00000604599 H3BRN7 92 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 C8orf86Q6ZUL3 223 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 RNF185Q96GF1 192 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 TNFRSF6BO95407 300 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 SFTA2Q6UW10 78 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 TDHQ8IZJ6 230 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 ZNF48Q96MX3 618 aaPredicted RBP9.75□□□□□ -0.85
CDCA3-212ENST00000604599 AAMDCQ9H7C9 122 aa9.75□□□□□ -0.85
CDCA3-212ENST00000604599 CSMD1Q96PZ7 3565 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 TEX22C9J3V5 150 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 K7EM74 188 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 IGHG3P01860 377 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 ZNF80P51504 273 aaPredicted RBP9.74□□□□□ -0.85
CDCA3-212ENST00000604599 VSTM5A8MXK1 200 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 I3L2K1 104 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 SRSF1Q07955 248 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDCA3-212ENST00000604599 FOXI1Q12951 378 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 TEX36Q5VZQ5 186 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 LYPD1Q8N2G4 141 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 SIGLEC9Q9Y336 463 aa9.74□□□□□ -0.85
CDCA3-212ENST00000604599 NDUFA3O95167 84 aa9.73□□□□□ -0.85
CDCA3-212ENST00000604599 PSMG4Q5JS54 123 aa9.73□□□□□ -0.85
CDCA3-212ENST00000604599 GLMPQ8WWB7 406 aa9.73□□□□□ -0.85
CDCA3-212ENST00000604599 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
CDCA3-212ENST00000604599 FBXL15Q9H469 300 aa9.73□□□□□ -0.85
CDCA3-212ENST00000604599 TNRC18O15417 2968 aaPredicted RBP9.73□□□□□ -0.85
CDCA3-212ENST00000604599 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
CDCA3-212ENST00000604599 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
CDCA3-212ENST00000604599 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
CDCA3-212ENST00000604599 ATP5LO75964 103 aa9.72□□□□□ -0.85
CDCA3-212ENST00000604599 ORM1P02763 201 aa9.72□□□□□ -0.85
CDCA3-212ENST00000604599 FHL3Q13643 280 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms