RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 IGHV3-21A0A0B4J1V1 117 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 A0A1W2PPI3 338 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 WI2-2373I1.2A0A1W2PRP0 233 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 VSTM5A8MXK1 200 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 OR11H12B2RN74 326 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 E7EUB6 86 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 SMKR1H3BMG3 65 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 K7ESF4 209 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 SPRY3O43610 288 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 CFIP05156 583 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 EVI2AP22794 236 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 FOXI1Q12951 378 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 OR11H1Q8NG94 326 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 OR11H2Q8NH07 326 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 DLX4Q92988 240 aaPredicted RBP5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 C20orf78Q9BR46 151 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 SCNM1Q9BWG6 230 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 VCX2Q9H322 139 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 AAMDCQ9H7C9 122 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 ERG28Q9UKR5 140 aa5.09□□□□□ -1.6
SRGAP2-211ENST00000604423 TMEM8BA6NDV4 472 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 K7EMI3 77 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 NTN3O00634 580 aaPredicted RBP5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 IL4P05112 153 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 INSL3P51460 131 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 TMEM178AQ8NBL3 297 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 C1orf162Q8NEQ5 155 aaPredicted RBP5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 DEFB108BQ8NET1 73 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 RPEQ96AT9 228 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 ASCL2Q99929 193 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 RASL11BQ9BPW5 248 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 NGBQ9NPG2 151 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 TMEM160Q9NX00 188 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 SPRR3Q9UBC9 169 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 SS18L2Q9UHA2 77 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 NAV3Q8IVL0 2385 aa5.08□□□□□ -1.6
SRGAP2-211ENST00000604423 CGB1A6NKQ9 187 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 OVOL3O00110 214 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 TSPAN13O95857 204 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 PAX8Q06710 450 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 FAM201AQ5SY85 155 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 DUX4L9Q6RFH8 374 aaPredicted RBP5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 Q6ZUT4 128 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 Q71RC1 249 aaPredicted RBP5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 LYPD1Q8N2G4 141 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 RNF7Q9UBF6 113 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 LINC00312Q9Y6C7 94 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 DSCAMO60469 2012 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 TRBV19A0A075B6N1 114 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 IGHV1-18A0A0C4DH31 117 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 ENSAO43768 121 aaKnown RBP5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 SH2D1AO60880 128 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 RBP4P02753 201 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 CRYGCP07315 174 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 APELAP0DMC3 54 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 PPIFP30405 207 aaKnown RBP5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 RPL27AP46776 148 aaKnown RBP5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 CXCL12P48061 93 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 Q6ZS92 163 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 FAM216BQ8N7L0 139 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 LINC00482Q8N8I6 264 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 MYOZ3Q8TDC0 251 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 C8orf49Q96NF6 230 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 GAFA1Q96PS6 74 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 CCL13Q99616 98 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 ZMAT4Q9H898 229 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 PRO0461Q9UI25 63 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 HHLA3Q9XRX5 114 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 PRR14LQ5THK1 2151 aa5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 HEATR1Q9H583 2144 aaKnown RBP5.07□□□□□ -1.6
SRGAP2-211ENST00000604423 TRAV40A0A0B4J280 105 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 HOXA3O43365 443 aaPredicted RBP5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 LHBP01229 141 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 PLNP26678 52 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 PSMB2P49721 201 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 CRIP1P50238 77 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 ZFAND6Q6FIF0 208 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 TMEM158Q8WZ71 300 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 RNF183Q96D59 192 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 CDIP1Q9H305 208 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 FAM186AA6NE01 2351 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 LOC107984156A0A0G2JMH3 177 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 PRB4P10163 310 aaPredicted RBP5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 TNFAIP6P98066 277 aaPredicted RBP5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 GAGE5Q13069 117 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 GAGE6Q13070 117 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 CFAP126Q5VTH2 177 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 SIGLEC15Q6ZMC9 328 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 ARL17AQ8IVW1 177 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 TEX29Q8N6K0 151 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 GLMPQ8WWB7 406 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 PPDPFLQ8WWR9 84 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 TMEM133Q9H2Q1 129 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 LINC00574Q9H8X3 128 aa5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 ZNF71Q9NQZ8 489 aaPredicted RBP5.06□□□□□ -1.6
SRGAP2-211ENST00000604423 MRPL35Q9NZE8 188 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms