RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 ZHX1-C8orf76Q96EF9 292 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 ARL5BQ96KC2 179 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 LINC00208Q96KT6 92 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 SIGMAR1Q99720 223 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 CACYBPQ9HB71 228 aaKnown RBP-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 POPDC3Q9HBV1 291 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 U3KQA8 63 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 FAM208BQ5VWN6 2430 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 NISCHQ9Y2I1 1504 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 TNXBP22105 4242 aa-0.44□□□□□ -2.48
TUBE1-205ENST00000603651 HSPG2P98160 4391 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 PCLOQ9Y6V0 5065 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 A0A096LPI6 279 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 DUXBA0A1W2PPF3 345 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 K7ERJ3 54 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 PIAS1O75925 651 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 IFNA7P01567 189 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 C1QBP02746 253 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 IDO1P14902 403 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 NFYBP25208 207 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 ZNF56Q15929 161 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 KRTAP19-7Q3SYF9 63 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 VMO1Q7Z5L0 202 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 LINC00269Q8N2A0 174 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 OR8J2Q8NGG1 315 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 PRAP1Q96NZ9 151 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 KMT2CQ8NEZ4 4911 aaKnown RBP-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 CHD9Q3L8U1 2897 aa-0.45□□□□□ -2.48
TUBE1-205ENST00000603651 ADGRL3Q9HAR2 1447 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 PLB1Q6P1J6 1458 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 A0A1W2PRS3 328 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 SMIM23A6NLE4 172 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 TMEM114B3SHH9 223 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 RER1O15258 196 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 SULT1C4O75897 302 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 EVI2AP22794 236 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 TMBIM6P55061 237 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 ZNF714Q96N38 554 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 CST11Q9H112 138 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 F8P00451 2351 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 TRPM7Q96QT4 1865 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 TANC1Q9C0D5 1861 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 ATG2AQ2TAZ0 1938 aa-0.46□□□□□ -2.48
TUBE1-205ENST00000603651 ZANQ9Y493 2812 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 PCF11O94913 1555 aaKnown RBP-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 LOC107984156A0A0G2JMH3 177 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 NBDYA0A0U1RRE5 68 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 PRORSD1PA6NEY8 169 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 HMGB3O15347 200 aaKnown RBP-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 DIAPH2-AS1Q14236 149 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 FXYD3Q14802 87 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 TAF1AQ15573 450 aaPredicted RBP-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 MSMO1Q15800 293 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 PTRHD1Q6GMV3 140 aaKnown RBP-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 DEFB132Q7Z7B7 95 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 ARL17AQ8IVW1 177 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 C5orf56Q8N8D9 126 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 OR10X1Q8NGY0 326 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 NMNAT1Q9HAN9 279 aaPredicted RBP-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 NAT8BQ9UHF3 227 aa-0.47□□□□□ -2.48
TUBE1-205ENST00000603651 KIAA1549LQ6ZVL6 1849 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 NIPSNAP2O75323 286 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 BANF1O75531 89 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 RPS3P23396 243 aaKnown RBP eCLIP-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 CEBPGP53567 150 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 HSPE1P61604 102 aaKnown RBP-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 CCL7P80098 99 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 LIN52Q52LA3 116 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 CSAG1Q6PB30 78 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 FAM216BQ8N7L0 139 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 GPX7Q96SL4 187 aaPredicted RBP-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 ENY2Q9NPA8 101 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 FAM32AQ9Y421 112 aaKnown RBP-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 DSPPQ9NZW4 1301 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 AFDNP55196 1824 aaKnown RBP-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 ANK1P16157 1881 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 NCAPD3P42695 1498 aa-0.48□□□□□ -2.49
TUBE1-205ENST00000603651 KMT2AQ03164 3969 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 A0A096LNT2 108 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 TRAV5A0A0B4J249 113 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 LOC101927531A0A1B0GV80 90 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 LYRM1O43325 122 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 HIST1H2BKO60814 126 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 CST7O76096 145 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 TRGC2P03986 189 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 IFNA4P05014 189 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 HIST1H2BJP06899 126 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 CST2P09228 141 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 ERVS71-1P61550 626 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 NCALDP61601 193 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 ITGB3BPQ13352 177 aaPredicted RBP-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 NEDD8Q15843 81 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 VMA21Q3ZAQ7 101 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 PHF5AQ7RTV0 110 aaKnown RBP-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 C5orf17Q8NAS9 161 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 BTF3L4Q96K17 158 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 MAP1LC3BQ9GZQ8 125 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 SLC22A13Q9Y226 551 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 HERC1Q15751 4861 aa-0.49□□□□□ -2.49
TUBE1-205ENST00000603651 CD109Q6YHK3 1445 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms