RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	TMEM183B	Q1AE95	376 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	CENPW	Q5EE01	88 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	SAMD13	Q5VXD3	122 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	ADAMTSL5	Q6ZMM2	481 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	DYNLRB2	Q8TF09	96 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	MRPL53	Q96EL3	112 aa	Known RBP	13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	FMC1	Q96HJ9	113 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	MLX	Q9UH92	298 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	KLF12	Q9Y4X4	402 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	TRBV20OR9-2	A0A075B6H5	130 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	SERTM2	A0A1B0GWG4	89 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	ISLR	O14498	428 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	RPL23	P62829	140 aa	Known RBP	13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	LCN12	Q6JVE5	192 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	GBGT1	Q8N5D6	347 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	RNF182	Q8N6D2	247 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	LY96	Q9Y6Y9	160 aa		13.56	□□□□□ -0.24
MACF1-233	ENST00000602421	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.55	□□□□□ -0.24
MACF1-233	ENST00000602421	DNASE2	O00115	360 aa	Predicted RBP	13.55	□□□□□ -0.24
MACF1-233	ENST00000602421	SOCS3	O14543	225 aa		13.55	□□□□□ -0.24
MACF1-233	ENST00000602421	RHEB	Q15382	184 aa		13.55	□□□□□ -0.24
MACF1-233	ENST00000602421	PSG3	Q16557	428 aa		13.55	□□□□□ -0.24
MACF1-233	ENST00000602421	WFDC3	Q8IUB2	231 aa		13.55	□□□□□ -0.24
MACF1-233	ENST00000602421	C7orf77	A4D0Y5	90 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	PGPEP1L	A6NFU8	196 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.54	□□□□□ -0.24
MACF1-233	ENST00000602421		B4DEV8	164 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	SCO1	O75880	301 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	ID1	P41134	155 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	PAFAH1B2	P68402	229 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	KRTAP24-1	Q3LI83	254 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	LINC01551	Q86U37	167 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	BAGE2	Q86Y30	109 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	TMEM75	Q8N9X5	138 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	OCC1	Q8TAD7	63 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	SGK494	Q96LW2	274 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	IGF2BP2-AS1	Q96M15	143 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	MS4A6A	Q9H2W1	248 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	RPS10P5	Q9NQ39	176 aa		13.54	□□□□□ -0.24
MACF1-233	ENST00000602421	JMJD1C	Q15652	2540 aa		13.53	□□□□□ -0.24
MACF1-233	ENST00000602421	PF4	P02776	101 aa		13.53	□□□□□ -0.24
MACF1-233	ENST00000602421	CITED1	Q99966	193 aa		13.53	□□□□□ -0.24
MACF1-233	ENST00000602421	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.53	□□□□□ -0.24
MACF1-233	ENST00000602421	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	TRAV8-1	A0A0A6YYK1	113 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	TRBV6-1	A0A0K0K1D8	114 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	IGKV2D-40	P01614	121 aa	Predicted RBP	13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	PRB4	P10163	310 aa	Predicted RBP	13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	TFPI2	P48307	235 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	PRNT	Q86SH4	94 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	PRIMA1	Q86XR5	153 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	ZNF738	Q8NE65	137 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	DCANP1	Q8TF63	244 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	C20orf173	Q96LM9	149 aa		13.52	□□□□□ -0.25
MACF1-233	ENST00000602421	FBLL1	A6NHQ2	334 aa	Known RBP	13.51	□□□□□ -0.25
MACF1-233	ENST00000602421	FLI1	Q01543	452 aa	Predicted RBP	13.51	□□□□□ -0.25
MACF1-233	ENST00000602421	DEFB114	Q30KQ6	69 aa		13.51	□□□□□ -0.25
MACF1-233	ENST00000602421	SIGLEC8	Q9NYZ4	499 aa		13.51	□□□□□ -0.25
MACF1-233	ENST00000602421	PSG8	Q9UQ74	426 aa		13.51	□□□□□ -0.25
MACF1-233	ENST00000602421	TEP1	Q99973	2627 aa	Known RBP	13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	PRAC2	D3DTV9	90 aa		13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	LTA	P01374	205 aa		13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	IGLV2-11	P01706	119 aa		13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	MT-ND4L	P03901	98 aa		13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	MGST1	P10620	155 aa	Known RBP	13.5	□□□□□ -0.25
MACF1-233	ENST00000602421		Q86TA4	180 aa		13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	NIPBL	Q6KC79	2804 aa	eCLIP	13.5	□□□□□ -0.25
MACF1-233	ENST00000602421	RBAKDN	A6NC62	111 aa		13.49	□□□□□ -0.25
MACF1-233	ENST00000602421		K7EQG2	157 aa		13.49	□□□□□ -0.25
MACF1-233	ENST00000602421	IGLV2-8	P01709	118 aa		13.49	□□□□□ -0.25
MACF1-233	ENST00000602421	NHLRC2	Q8NBF2	726 aa		13.49	□□□□□ -0.25
MACF1-233	ENST00000602421	ISOC2	Q96AB3	205 aa		13.49	□□□□□ -0.25
MACF1-233	ENST00000602421	SMIM12	Q96EX1	92 aa		13.49	□□□□□ -0.25
MACF1-233	ENST00000602421		K7EN84	100 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	TSPAN4	O14817	238 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	SNRPD3	P62318	126 aa	Known RBP	13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	RNF212	Q495C1	297 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	TMEM61	Q8N0U2	210 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	VGLL1	Q99990	258 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	ZFP30	Q9Y2G7	519 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421	MAST4	O15021	2626 aa		13.48	□□□□□ -0.25
MACF1-233	ENST00000602421		A0A087WWC5	75 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	TRAV2	A0A0B4J234	112 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	TRAV25	A0A0B4J276	109 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	SAP30	O75446	220 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	GCG	P01275	180 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	CD300E	Q496F6	205 aa	Predicted RBP	13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	TMEM183A	Q8IXX5	376 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	ZNF688	P0C7X2	276 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	ERCC8	Q13216	396 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	BTN1A1	Q13410	526 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	OR5I1	Q13606	314 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	LINC00482	Q8N8I6	264 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	OR10J6P	Q8NGY7	276 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	SFRP2	Q96HF1	295 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	MLST8	Q9BVC4	326 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	CTDSP1	Q9GZU7	261 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	BIN3	Q9NQY0	253 aa		13.47	□□□□□ -0.25
MACF1-233	ENST00000602421	SMCO4	Q9NRQ5	59 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms