RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
SHANK2-218ENST00000601538 GFI1Q99684 422 aa10.07□□□□□ -0.8
SHANK2-218ENST00000601538 B5MCH6 92 aa10.07□□□□□ -0.8
SHANK2-218ENST00000601538 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
SHANK2-218ENST00000601538 SYNJ2BPP57105 145 aa10.06□□□□□ -0.8
SHANK2-218ENST00000601538 SS18L2Q9UHA2 77 aa10.06□□□□□ -0.8
SHANK2-218ENST00000601538 MRPL55Q7Z7F7 128 aaKnown RBP10.06□□□□□ -0.8
SHANK2-218ENST00000601538 RNF5Q99942 180 aa10.06□□□□□ -0.8
SHANK2-218ENST00000601538 PLA2G2FQ9BZM2 168 aa10.06□□□□□ -0.8
SHANK2-218ENST00000601538 HAMPP81172 84 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 IGFBP6P24592 240 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-218ENST00000601538 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 RBX1P62877 108 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 LIME1Q9H400 295 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 LINC01565O15544 149 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 RFNGQ9Y644 331 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 RHODO00212 210 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 SH2D1AO60880 128 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 SMIM10L1P0DMW3 83 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 SMIM10Q96HG1 83 aa10.05□□□□□ -0.8
SHANK2-218ENST00000601538 LOC102723996A0A087X1L8 192 aa10.04□□□□□ -0.8
SHANK2-218ENST00000601538 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
SHANK2-218ENST00000601538 COX6A1P12074 109 aa10.04□□□□□ -0.8
SHANK2-218ENST00000601538 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
SHANK2-218ENST00000601538 VOPP1Q96AW1 172 aa10.04□□□□□ -0.8
SHANK2-218ENST00000601538 hADV29S1A0JD25 119 aa10.04□□□□□ -0.8
SHANK2-218ENST00000601538 PRSS22Q9GZN4 317 aa10.04□□□□□ -0.8
SHANK2-218ENST00000601538 H0YJW9 148 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 FAM168AQ92567 244 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 IGHG2P01859 326 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 HTN3P15516 51 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 CARD19Q96LW7 228 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 TECTAO75443 2155 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 TRAV13-1A0A0B4J241 112 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 MRPL23Q16540 153 aaKnown RBP10.03□□□□□ -0.8
SHANK2-218ENST00000601538 C1orf159Q96HA4 380 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 TRAV40A0A0B4J280 105 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 LOC101059948A0A1B0GTJ6 334 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 F6UB75 175 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
SHANK2-218ENST00000601538 IGKV2-40A0A087WW87 121 aaPredicted RBP10.02□□□□□ -0.8
SHANK2-218ENST00000601538 IGKV2D-40P01614 121 aaPredicted RBP10.02□□□□□ -0.8
SHANK2-218ENST00000601538 CECR9P0C854 216 aa10.02□□□□□ -0.8
SHANK2-218ENST00000601538 SLC25A16P16260 332 aa10.02□□□□□ -0.8
SHANK2-218ENST00000601538 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.8
SHANK2-218ENST00000601538 NBL1P41271 181 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 SMRP1Q8NCR6 262 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 I3L3M4 83 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 QRFPP83859 136 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 IGKV1D-13A0A0B4J2D9 117 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 PRSS46E5RG02 174 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 TIMM23O14925 209 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 IGLC1P0CG04 106 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 IGKV1-13P0DP09 117 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 CRLF1O75462 422 aa10.02□□□□□ -0.81
SHANK2-218ENST00000601538 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
SHANK2-218ENST00000601538 IGLL1P15814 213 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 S4R3C0 116 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 HLA-DRB4P13762 266 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 C15orf32Q32M92 178 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 HLA-DRB4X5D2U9 266 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
SHANK2-218ENST00000601538 Q6ZS92 163 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 Q8N8P6 123 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 DSCAMO60469 2012 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 C17orf100A8MU93 164 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 BSPH1Q075Z2 132 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 RPL15P61313 204 aaKnown RBP10.01□□□□□ -0.81
SHANK2-218ENST00000601538 COLCA1Q6ZS62 124 aa10.01□□□□□ -0.81
SHANK2-218ENST00000601538 FAM223BA6NKX1 122 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 FAM223AQ8IWN6 122 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 F8VRH5 84 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 MP68P56378 58 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 ZNF474Q6S9Z5 364 aaPredicted RBP10□□□□□ -0.81
SHANK2-218ENST00000601538 PAQR4Q8N4S7 273 aaPredicted RBP10□□□□□ -0.81
SHANK2-218ENST00000601538 BMPERQ8N8U9 685 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 MORN5Q5VZ52 161 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 A0A1W2PR77 199 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 Q6ZVH6 145 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
SHANK2-218ENST00000601538 V9GYY9 64 aa10□□□□□ -0.81
SHANK2-218ENST00000601538 ZNF329Q86UD4 541 aa9.99□□□□□ -0.81
SHANK2-218ENST00000601538 WNT2P09544 360 aa9.99□□□□□ -0.81
SHANK2-218ENST00000601538 HGFACQ04756 655 aa9.99□□□□□ -0.81
SHANK2-218ENST00000601538 TNRC6BQ9UPQ9 1833 aaKnown RBP9.99□□□□□ -0.81
SHANK2-218ENST00000601538 PSCAO43653 123 aa9.99□□□□□ -0.81
SHANK2-218ENST00000601538 FUSP35637 526 aaKnown RBP eCLIP9.99□□□□□ -0.812e-6■■□□□ 12
SHANK2-218ENST00000601538 PSG7Q13046 419 aa9.99□□□□□ -0.81
SHANK2-218ENST00000601538 C1orf53Q5VUE5 145 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms